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Date:      Wed, 3 Oct 2018 07:41:14 +0000 (UTC)
From:      Yuri Victorovich <yuri@FreeBSD.org>
To:        ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org
Subject:   svn commit: r481145 - in head/math: . deal.ii deal.ii/files
Message-ID:  <201810030741.w937fEsk013650@repo.freebsd.org>

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Author: yuri
Date: Wed Oct  3 07:41:14 2018
New Revision: 481145
URL: https://svnweb.freebsd.org/changeset/ports/481145

Log:
  New port: math/deal.ii: Finite element Differential Equations Analysis Library (DEAL)
  
  The official name of the project is deal.II

Added:
  head/math/deal.ii/
  head/math/deal.ii/Makefile   (contents, props changed)
  head/math/deal.ii/distinfo   (contents, props changed)
  head/math/deal.ii/files/
  head/math/deal.ii/files/patch-doc_CMakeLists.txt   (contents, props changed)
  head/math/deal.ii/pkg-descr   (contents, props changed)
  head/math/deal.ii/pkg-plist   (contents, props changed)
Modified:
  head/math/Makefile

Modified: head/math/Makefile
==============================================================================
--- head/math/Makefile	Wed Oct  3 07:07:02 2018	(r481144)
+++ head/math/Makefile	Wed Oct  3 07:41:14 2018	(r481145)
@@ -174,6 +174,7 @@
     SUBDIR += cryptominisat
     SUBDIR += cvc3
     SUBDIR += cvc4
+    SUBDIR += deal.ii
     SUBDIR += diehard
     SUBDIR += dieharder
     SUBDIR += djbfft

Added: head/math/deal.ii/Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/math/deal.ii/Makefile	Wed Oct  3 07:41:14 2018	(r481145)
@@ -0,0 +1,65 @@
+# $FreeBSD$
+
+PORTNAME=	deal.II
+DISTVERSIONPREFIX=	v
+DISTVERSION=	9.0.0
+CATEGORIES=	math devel
+
+MAINTAINER=	yuri@FreeBSD.org
+COMMENT=	Finite element Differential Equations Analysis Library (DEAL)
+
+LICENSE=	GPLv2
+LICENSE_FILE=	${WRKSRC}/LICENSE
+
+LIB_DEPENDS=	libgsl.so:math/gsl \
+		libhdf5.so:science/hdf5 \
+		libmetis.so:math/metis \
+		libsundials_arkode.so:math/sundials \
+		libtbb.so:devel/tbb
+
+USES=		cmake:outsource compiler:c++17-lang localbase:ldflags
+USE_GITHUB=	yes
+GH_ACCOUNT=	${PORTNAME:tl:S/.//}
+GH_PROJECT=	${PORTNAME:tl:S/.//}
+USE_LDCONFIG=	yes
+
+CMAKE_OFF=	DEAL_II_ALLOW_BUNDLED DEAL_II_COMPONENT_EXAMPLES \
+		DEAL_II_WITH_P4EST DEAL_II_WITH_TRILINOS DEAL_II_WITH_UMFPACK DEAL_II_WITH_SLEPC \
+		DEAL_II_WITH_NANOFLANN DEAL_II_WITH_MUPARSER DEAL_II_WITH_ASSIMP DEAL_II_WITH_ARPACK \
+		DEAL_II_WITH_ADOLC DEAL_II_WITH_SUNDIALS DEAL_II_WITH_HDF5
+
+OPTIONS_DEFINE=		LAPACK MPI NETCDF OPENCASCADE PETSC SCALAPACK
+OPTIONS_DEFAULT=	MPI
+
+LAPACK_DESC=		Build with LAPACK for matrix operations
+LAPACK_USES=		fortran
+LAPACK_CMAKE_BOOL=	DEAL_II_WITH_LAPACK
+LAPACK_LIB_DEPENDS=	libblas.so:math/blas \
+			liblapack.so:math/lapack
+LAPACK_BROKEN=		can't find lapack library
+
+MPI_USES=		fortran
+MPI_CMAKE_BOOL=		DEAL_II_WITH_MPI
+MPI_LIB_DEPENDS=	libboost_iostreams.so:devel/boost-libs \
+			libmpi.so:net/openmpi
+
+NETCDF_DESC=		Compile with Netcdf (only with MPI)
+NETCDF_CMAKE_BOOL=	DEAL_II_WITH_NETCDF
+NETCDF_CMAKE_ON=	-DNETCDF_INCLUDE_DIR:STRING=${LOCALBASE}/include -DNETCDF_CPLUSPLUS_LIBRARY:STRING=${LOCALBASE}/lib/libnetcdf_c++4.so
+NETCDF_BROKEN=		see https://github.com/dealii/dealii/issues/7263
+
+OPENCASCADE_DESC=	Build with OpenCascade
+OPENCASCADE_CMAKE_BOOL=	DEAL_II_WITH_OPENCASCADE
+OPENCASCADE_CMAKE_ON=	-DOPENCASCADE_INCLUDE_DIR:STRING=${LOCALBASE}/include/OpenCASCADE
+OPENCASCADE_LIB_DEPENDS=	libTKernel.so:cad/opencascade
+
+PETSC_DESC=		Compile with Petsc (only with MPI)
+PETSC_CMAKE_BOOL=	DEAL_II_WITH_PETSC
+PETSC_LIB_DEPENDS=	libpetsc.so:science/PETSc
+PETSC_BROKEN=		see https://github.com/dealii/dealii/issues/7260
+
+SCALAPACK_DESC=		Compile with ScaLAPACK (only with MPI)
+SCALAPACK_CMAKE_BOOL=	DEAL_II_WITH_SCALAPACK
+SCALAPACK_IMPLIES=	MPI LAPACK
+
+.include <bsd.port.mk>

Added: head/math/deal.ii/distinfo
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/math/deal.ii/distinfo	Wed Oct  3 07:41:14 2018	(r481145)
@@ -0,0 +1,3 @@
+TIMESTAMP = 1538522671
+SHA256 (dealii-dealii-v9.0.0_GH0.tar.gz) = c9eed69b9909b432102055e843981df181cb96a4d274785feeb70f83a0f5bee8
+SIZE (dealii-dealii-v9.0.0_GH0.tar.gz) = 17629427

Added: head/math/deal.ii/files/patch-doc_CMakeLists.txt
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/math/deal.ii/files/patch-doc_CMakeLists.txt	Wed Oct  3 07:41:14 2018	(r481145)
@@ -0,0 +1,21 @@
+--- doc/CMakeLists.txt.orig	2018-10-03 01:10:49 UTC
++++ doc/CMakeLists.txt
+@@ -55,12 +55,12 @@ ENDIF(DEAL_II_COMPONENT_DOCUMENTATION)
+ # Always install a minimalistic README and LICENSE file:
+ #
+ 
+-INSTALL(FILES
+-  ${CMAKE_SOURCE_DIR}/README.md
+-  ${CMAKE_SOURCE_DIR}/LICENSE
+-  DESTINATION ${DEAL_II_DOCREADME_RELDIR}
+-  COMPONENT library
+-  )
++#INSTALL(FILES
++#  ${CMAKE_SOURCE_DIR}/README.md
++#  ${CMAKE_SOURCE_DIR}/LICENSE
++#  DESTINATION ${DEAL_II_DOCREADME_RELDIR}
++#  COMPONENT library
++#  )
+ 
+ #
+ # Add a dummy target to make documentation files known to IDEs.

Added: head/math/deal.ii/pkg-descr
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/math/deal.ii/pkg-descr	Wed Oct  3 07:41:14 2018	(r481145)
@@ -0,0 +1,24 @@
+deal.II - a name that originally meant to indicate that it is the successor to
+the Differential Equations Analysis Library - is a C++ program library targeted
+at the computational solution of partial differential equations using adaptive
+finite elements. It uses state-of-the-art programming techniques to offer you a
+modern interface to the complex data structures and algorithms required.
+
+The main aim of deal.II is to enable rapid development of modern finite element
+codes, using among other aspects adaptive meshes and a wide array of tools
+classes often used in finite element program. Writing such programs is a
+non-trivial task, and successful programs tend to become very large and complex.
+We believe that this is best done using a program library that takes care of the
+details of grid handling and refinement, handling of degrees of freedom, input
+of meshes and output of results in graphics formats, and the like. Likewise,
+support for several space dimensions at once is included in a way such that
+programs can be written independent of the space dimension without unreasonable
+penalties on run-time and memory consumption.
+
+deal.II is widely used in many academic and commercial projects. For its
+creation, its principal authors have received the 2007 J. H. Wilkinson Prize for
+Numerical Software. It is also part of the industry standard SPEC CPU 2006 and
+SPEC CPU 2017 benchmark suites used to determine the speed of computers and
+compilers.
+
+WWW: https://www.dealii.org/

Added: head/math/deal.ii/pkg-plist
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/math/deal.ii/pkg-plist	Wed Oct  3 07:41:14 2018	(r481145)
@@ -0,0 +1,509 @@
+include/deal.II/algorithms/any_data.h
+include/deal.II/algorithms/named_selection.h
+include/deal.II/algorithms/newton.h
+include/deal.II/algorithms/newton.templates.h
+include/deal.II/algorithms/operator.h
+include/deal.II/algorithms/operator.templates.h
+include/deal.II/algorithms/theta_timestepping.h
+include/deal.II/algorithms/theta_timestepping.templates.h
+include/deal.II/algorithms/timestep_control.h
+include/deal.II/base/aligned_vector.h
+include/deal.II/base/array_view.h
+include/deal.II/base/auto_derivative_function.h
+include/deal.II/base/bounding_box.h
+include/deal.II/base/complex_overloads.h
+include/deal.II/base/conditional_ostream.h
+include/deal.II/base/config.h
+include/deal.II/base/convergence_table.h
+include/deal.II/base/cuda.h
+include/deal.II/base/cuda_size.h
+include/deal.II/base/data_out_base.h
+include/deal.II/base/derivative_form.h
+include/deal.II/base/event.h
+include/deal.II/base/exceptions.h
+include/deal.II/base/flow_function.h
+include/deal.II/base/function.h
+include/deal.II/base/function.templates.h
+include/deal.II/base/function_bessel.h
+include/deal.II/base/function_cspline.h
+include/deal.II/base/function_derivative.h
+include/deal.II/base/function_lib.h
+include/deal.II/base/function_parser.h
+include/deal.II/base/function_spherical.h
+include/deal.II/base/function_time.h
+include/deal.II/base/function_time.templates.h
+include/deal.II/base/geometric_utilities.h
+include/deal.II/base/geometry_info.h
+include/deal.II/base/graph_coloring.h
+include/deal.II/base/index_set.h
+include/deal.II/base/iterator_range.h
+include/deal.II/base/job_identifier.h
+include/deal.II/base/linear_index_iterator.h
+include/deal.II/base/logstream.h
+include/deal.II/base/memory_consumption.h
+include/deal.II/base/mg_level_object.h
+include/deal.II/base/mpi.h
+include/deal.II/base/mpi.templates.h
+include/deal.II/base/multithread_info.h
+include/deal.II/base/numbers.h
+include/deal.II/base/parallel.h
+include/deal.II/base/parameter_acceptor.h
+include/deal.II/base/parameter_handler.h
+include/deal.II/base/parsed_function.h
+include/deal.II/base/partitioner.h
+include/deal.II/base/partitioner.templates.h
+include/deal.II/base/path_search.h
+include/deal.II/base/patterns.h
+include/deal.II/base/point.h
+include/deal.II/base/polynomial.h
+include/deal.II/base/polynomial_space.h
+include/deal.II/base/polynomials_abf.h
+include/deal.II/base/polynomials_adini.h
+include/deal.II/base/polynomials_bdm.h
+include/deal.II/base/polynomials_bernstein.h
+include/deal.II/base/polynomials_integrated_legendre_sz.h
+include/deal.II/base/polynomials_nedelec.h
+include/deal.II/base/polynomials_p.h
+include/deal.II/base/polynomials_piecewise.h
+include/deal.II/base/polynomials_rannacher_turek.h
+include/deal.II/base/polynomials_raviart_thomas.h
+include/deal.II/base/polynomials_rt_bubbles.h
+include/deal.II/base/process_grid.h
+include/deal.II/base/qprojector.h
+include/deal.II/base/quadrature.h
+include/deal.II/base/quadrature_lib.h
+include/deal.II/base/quadrature_point_data.h
+include/deal.II/base/quadrature_selector.h
+include/deal.II/base/revision.h
+include/deal.II/base/sacado_product_type.h
+include/deal.II/base/signaling_nan.h
+include/deal.II/base/smartpointer.h
+include/deal.II/base/std_cxx11/array.h
+include/deal.II/base/std_cxx11/bind.h
+include/deal.II/base/std_cxx11/condition_variable.h
+include/deal.II/base/std_cxx11/function.h
+include/deal.II/base/std_cxx11/iterator.h
+include/deal.II/base/std_cxx11/mutex.h
+include/deal.II/base/std_cxx11/shared_ptr.h
+include/deal.II/base/std_cxx11/thread.h
+include/deal.II/base/std_cxx11/tuple.h
+include/deal.II/base/std_cxx11/type_traits.h
+include/deal.II/base/std_cxx11/unique_ptr.h
+include/deal.II/base/std_cxx14/algorithm.h
+include/deal.II/base/std_cxx14/memory.h
+include/deal.II/base/std_cxx14/utility.h
+include/deal.II/base/std_cxx1x/array.h
+include/deal.II/base/std_cxx1x/bind.h
+include/deal.II/base/std_cxx1x/condition_variable.h
+include/deal.II/base/std_cxx1x/function.h
+include/deal.II/base/std_cxx1x/mutex.h
+include/deal.II/base/std_cxx1x/shared_ptr.h
+include/deal.II/base/std_cxx1x/thread.h
+include/deal.II/base/std_cxx1x/tuple.h
+include/deal.II/base/std_cxx1x/type_traits.h
+include/deal.II/base/subscriptor.h
+include/deal.II/base/symmetric_tensor.h
+include/deal.II/base/symmetric_tensor.templates.h
+include/deal.II/base/synchronous_iterator.h
+include/deal.II/base/table.h
+include/deal.II/base/table_handler.h
+include/deal.II/base/table_indices.h
+include/deal.II/base/template_constraints.h
+include/deal.II/base/tensor.h
+include/deal.II/base/tensor_accessors.h
+include/deal.II/base/tensor_base.h
+include/deal.II/base/tensor_deprecated.h
+include/deal.II/base/tensor_function.h
+include/deal.II/base/tensor_function.templates.h
+include/deal.II/base/tensor_product_polynomials.h
+include/deal.II/base/tensor_product_polynomials_bubbles.h
+include/deal.II/base/tensor_product_polynomials_const.h
+include/deal.II/base/thread_local_storage.h
+include/deal.II/base/thread_management.h
+include/deal.II/base/time_stepping.h
+include/deal.II/base/time_stepping.templates.h
+include/deal.II/base/timer.h
+include/deal.II/base/types.h
+include/deal.II/base/utilities.h
+include/deal.II/base/vector_slice.h
+include/deal.II/base/vectorization.h
+include/deal.II/base/work_stream.h
+include/deal.II/differentiation/ad.h
+include/deal.II/differentiation/ad/ad_number_traits.h
+include/deal.II/differentiation/ad/ad_number_types.h
+include/deal.II/differentiation/ad/adolc_math.h
+include/deal.II/differentiation/ad/adolc_number_types.h
+include/deal.II/differentiation/ad/adolc_product_types.h
+include/deal.II/differentiation/ad/sacado_math.h
+include/deal.II/differentiation/ad/sacado_number_types.h
+include/deal.II/differentiation/ad/sacado_product_types.h
+include/deal.II/distributed/grid_refinement.h
+include/deal.II/distributed/grid_tools.h
+include/deal.II/distributed/p4est_wrappers.h
+include/deal.II/distributed/shared_tria.h
+include/deal.II/distributed/solution_transfer.h
+include/deal.II/distributed/tria.h
+include/deal.II/distributed/tria_base.h
+include/deal.II/dofs/block_info.h
+include/deal.II/dofs/dof_accessor.h
+include/deal.II/dofs/dof_accessor.templates.h
+include/deal.II/dofs/dof_faces.h
+include/deal.II/dofs/dof_handler.h
+include/deal.II/dofs/dof_handler_policy.h
+include/deal.II/dofs/dof_iterator_selector.h
+include/deal.II/dofs/dof_levels.h
+include/deal.II/dofs/dof_objects.h
+include/deal.II/dofs/dof_renumbering.h
+include/deal.II/dofs/dof_tools.h
+include/deal.II/dofs/function_map.h
+include/deal.II/dofs/number_cache.h
+include/deal.II/fe/block_mask.h
+include/deal.II/fe/component_mask.h
+include/deal.II/fe/fe.h
+include/deal.II/fe/fe_abf.h
+include/deal.II/fe/fe_base.h
+include/deal.II/fe/fe_bdm.h
+include/deal.II/fe/fe_bernstein.h
+include/deal.II/fe/fe_dg_vector.h
+include/deal.II/fe/fe_dg_vector.templates.h
+include/deal.II/fe/fe_dgp.h
+include/deal.II/fe/fe_dgp_monomial.h
+include/deal.II/fe/fe_dgp_nonparametric.h
+include/deal.II/fe/fe_dgq.h
+include/deal.II/fe/fe_enriched.h
+include/deal.II/fe/fe_face.h
+include/deal.II/fe/fe_nedelec.h
+include/deal.II/fe/fe_nothing.h
+include/deal.II/fe/fe_p1nc.h
+include/deal.II/fe/fe_poly.h
+include/deal.II/fe/fe_poly.templates.h
+include/deal.II/fe/fe_poly_face.h
+include/deal.II/fe/fe_poly_face.templates.h
+include/deal.II/fe/fe_poly_tensor.h
+include/deal.II/fe/fe_q.h
+include/deal.II/fe/fe_q_base.h
+include/deal.II/fe/fe_q_bubbles.h
+include/deal.II/fe/fe_q_dg0.h
+include/deal.II/fe/fe_q_hierarchical.h
+include/deal.II/fe/fe_q_iso_q1.h
+include/deal.II/fe/fe_rannacher_turek.h
+include/deal.II/fe/fe_raviart_thomas.h
+include/deal.II/fe/fe_rt_bubbles.h
+include/deal.II/fe/fe_series.h
+include/deal.II/fe/fe_system.h
+include/deal.II/fe/fe_tools.h
+include/deal.II/fe/fe_tools.templates.h
+include/deal.II/fe/fe_tools_extrapolate.templates.h
+include/deal.II/fe/fe_tools_interpolate.templates.h
+include/deal.II/fe/fe_trace.h
+include/deal.II/fe/fe_update_flags.h
+include/deal.II/fe/fe_values.h
+include/deal.II/fe/fe_values_extractors.h
+include/deal.II/fe/mapping.h
+include/deal.II/fe/mapping_c1.h
+include/deal.II/fe/mapping_cartesian.h
+include/deal.II/fe/mapping_fe_field.h
+include/deal.II/fe/mapping_manifold.h
+include/deal.II/fe/mapping_q.h
+include/deal.II/fe/mapping_q1.h
+include/deal.II/fe/mapping_q1_eulerian.h
+include/deal.II/fe/mapping_q_eulerian.h
+include/deal.II/fe/mapping_q_generic.h
+include/deal.II/gmsh/utilities.h
+include/deal.II/grid/cell_id.h
+include/deal.II/grid/composition_manifold.h
+include/deal.II/grid/filtered_iterator.h
+include/deal.II/grid/grid_generator.h
+include/deal.II/grid/grid_in.h
+include/deal.II/grid/grid_out.h
+include/deal.II/grid/grid_refinement.h
+include/deal.II/grid/grid_reordering.h
+include/deal.II/grid/grid_tools.h
+include/deal.II/grid/grid_tools_cache.h
+include/deal.II/grid/grid_tools_cache_update_flags.h
+include/deal.II/grid/intergrid_map.h
+include/deal.II/grid/magic_numbers.h
+include/deal.II/grid/manifold.h
+include/deal.II/grid/manifold_lib.h
+include/deal.II/grid/persistent_tria.h
+include/deal.II/grid/tensor_product_manifold.h
+include/deal.II/grid/tria.h
+include/deal.II/grid/tria_accessor.h
+include/deal.II/grid/tria_accessor.templates.h
+include/deal.II/grid/tria_boundary.h
+include/deal.II/grid/tria_boundary_lib.h
+include/deal.II/grid/tria_faces.h
+include/deal.II/grid/tria_iterator.h
+include/deal.II/grid/tria_iterator.templates.h
+include/deal.II/grid/tria_iterator_base.h
+include/deal.II/grid/tria_iterator_selector.h
+include/deal.II/grid/tria_levels.h
+include/deal.II/grid/tria_object.h
+include/deal.II/grid/tria_objects.h
+include/deal.II/hp/dof_faces.h
+include/deal.II/hp/dof_handler.h
+include/deal.II/hp/dof_level.h
+include/deal.II/hp/fe_collection.h
+include/deal.II/hp/fe_values.h
+include/deal.II/hp/mapping_collection.h
+include/deal.II/hp/q_collection.h
+include/deal.II/integrators/advection.h
+include/deal.II/integrators/divergence.h
+include/deal.II/integrators/elasticity.h
+include/deal.II/integrators/grad_div.h
+include/deal.II/integrators/l2.h
+include/deal.II/integrators/laplace.h
+include/deal.II/integrators/local_integrators.h
+include/deal.II/integrators/maxwell.h
+include/deal.II/integrators/patches.h
+include/deal.II/lac/arpack_solver.h
+include/deal.II/lac/block_indices.h
+include/deal.II/lac/block_linear_operator.h
+include/deal.II/lac/block_matrix_array.h
+include/deal.II/lac/block_matrix_base.h
+include/deal.II/lac/block_sparse_matrix.h
+include/deal.II/lac/block_sparse_matrix.templates.h
+include/deal.II/lac/block_sparse_matrix_ez.h
+include/deal.II/lac/block_sparse_matrix_ez.templates.h
+include/deal.II/lac/block_sparsity_pattern.h
+include/deal.II/lac/block_vector.h
+include/deal.II/lac/block_vector.templates.h
+include/deal.II/lac/block_vector_base.h
+include/deal.II/lac/chunk_sparse_matrix.h
+include/deal.II/lac/chunk_sparse_matrix.templates.h
+include/deal.II/lac/chunk_sparsity_pattern.h
+include/deal.II/lac/communication_pattern_base.h
+include/deal.II/lac/constrained_linear_operator.h
+include/deal.II/lac/constraint_matrix.h
+include/deal.II/lac/constraint_matrix.templates.h
+include/deal.II/lac/cuda_atomic.h
+include/deal.II/lac/cuda_solver_direct.h
+include/deal.II/lac/cuda_sparse_matrix.h
+include/deal.II/lac/cuda_vector.h
+include/deal.II/lac/diagonal_matrix.h
+include/deal.II/lac/dynamic_sparsity_pattern.h
+include/deal.II/lac/eigen.h
+include/deal.II/lac/exceptions.h
+include/deal.II/lac/filtered_matrix.h
+include/deal.II/lac/full_matrix.h
+include/deal.II/lac/full_matrix.templates.h
+include/deal.II/lac/generic_linear_algebra.h
+include/deal.II/lac/householder.h
+include/deal.II/lac/identity_matrix.h
+include/deal.II/lac/la_parallel_block_vector.h
+include/deal.II/lac/la_parallel_block_vector.templates.h
+include/deal.II/lac/la_parallel_vector.h
+include/deal.II/lac/la_parallel_vector.templates.h
+include/deal.II/lac/la_vector.h
+include/deal.II/lac/la_vector.templates.h
+include/deal.II/lac/lapack_full_matrix.h
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