Skip site navigation (1)Skip section navigation (2)
Date:      Sat, 19 Sep 2020 07:57:43 GMT
From:      pkg-fallout@FreeBSD.org
To:        yuri@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - 113amd64-default][science/lammps] Failed for lammps-2020.08.24 in build
Message-ID:  <202009190757.08J7vhfa045345@beefy9.nyi.freebsd.org>

next in thread | raw e-mail | index | archive | help
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: yuri@FreeBSD.org
Ident:          $FreeBSD: head/science/lammps/Makefile 546133 2020-08-25 01:38:41Z yuri $
Log URL:        http://beefy9.nyi.freebsd.org/data/113amd64-default/548810/logs/lammps-2020.08.24.log
Build URL:      http://beefy9.nyi.freebsd.org/build.html?mastername=113amd64-default&build=548810
Log:

=>> Building science/lammps
build started at Sat Sep 19 07:36:49 UTC 2020
port directory: /usr/ports/science/lammps
package name: lammps-2020.08.24
building for: FreeBSD 113amd64-default-job-13 11.3-RELEASE-p14 FreeBSD 11.3-RELEASE-p14 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/lammps/Makefile 546133 2020-08-25 01:38:41Z yuri $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1103000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1103000
UNAME_v=FreeBSD 11.3-RELEASE-p14
UNAME_r=11.3-RELEASE-p14
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/113amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/113amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=113amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/113amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for lammps-2020.08.24:
     EXCEPTIONS=on: Enable the use of C++ exceptions
     FFMPEG=on: FFmpeg support (WMA, AIFF, AC3, APE...)
     GZIP=on: Enable GZIP support
     JPEG=on: JPEG image format support
     PNG=on: PNG image format support
====> Enable parallelizations:
     MPI=on: MPI (Message Passing Interface) support
     OPENMP=on: Parallel processing support via OpenMP
====> Enable packages:
     H5MD=on: USER-H5MD package based on libhdf5
     KIM=on: KIM package based on the OpenKim library/repository
     KOKKOS=on: kokkos package based on the libkokkos library
     LATTE=on: latte package based on the liblatte library
     PLUMED=on: plumed package based on the plumed library
     VORONOI=on: voro++, Voronoi tessellation package
     VTK=off: USER-VTK package based on the external vtk package
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/lammps/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/lammps/work  HOME=/wrkdirs/usr/ports/science/lammps/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/lammps/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/lammps/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/lammps/work  HOME=/wrkdirs/usr/ports/science/lammps/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/lammps/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-alias
 ing "  CPP="cpp" CPPFLAGS="-isystem /usr/local/include"  LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc9  -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
EXCEPTIONS="" NO_EXCEPTIONS="@comment " FFMPEG="" NO_FFMPEG="@comment " GZIP="" NO_GZIP="@comment " H5MD="" NO_H5MD="@comment " JPEG="" NO_JPEG="@comment " KIM="" NO_KIM="@comment " KOKKOS="" NO_KOKKOS="@comment " LATTE="" NO_LATTE="@comment " MPI="" NO_MPI="@comment " OPENMP="" NO_OPENMP="@comment " PLUMED="" NO_PLUMED="@comment " PNG="" NO_PNG="@comment " VORONOI="" NO_VORONOI="@comment " VTK="@comment " NO_VTK="" CMAKE_BUILD_TYPE="release" OSREL=11.3 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/lammps"  EXAMPLESDIR="share/examples/lammps"  DATADIR="share/lammps"  WWWDIR="www/lammps"  ETCDIR="etc/lammps"
--End PLIST_SUB--

--SUB_LIST--
EXCEPTIONS="" NO_EXCEPTIONS="@comment " FFMPEG="" NO_FFMPEG="@comment " GZIP="" NO_GZIP="@comment " H5MD="" NO_H5MD="@comment " JPEG="" NO_JPEG="@comment " KIM="" NO_KIM="@comment " KOKKOS="" NO_KOKKOS="@comment " LATTE="" NO_LATTE="@comment " MPI="" NO_MPI="@comment " OPENMP="" NO_OPENMP="@comment " PLUMED="" NO_PLUMED="@comment " PNG="" NO_PNG="@comment " VORONOI="" NO_VORONOI="@comment " VTK="@comment " NO_VTK="" PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/lammps DOCSDIR=/usr/local/share/doc/lammps EXAMPLESDIR=/usr/local/share/examples/lammps  WWWDIR=/usr/local/www/lammps ETCDIR=/usr/local/etc/lammps
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=amd64
OPSYS=FreeBSD
_OSRELEASE=11.3-RELEASE-p14
OSREL=11.3
OSVERSION=1103000
PYTHONBASE=/usr/local
HAVE_COMPAT_IA32_KERN=YES
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   lammps-2020.08.24 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.15.4.txz
[113amd64-default-job-13] Installing pkg-1.15.4...
[113amd64-default-job-13] Extracting pkg-1.15.4: .......... done
===>   lammps-2020.08.24 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of lammps-2020.08.24
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by lammps-2020.08.24 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by lammps-2020.08.24 for building
=> SHA256 Checksum OK for lammps-lammps-2020.08.24-patch_24Aug2020_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by lammps-2020.08.24 for building
===>  Extracting for lammps-2020.08.24
=> SHA256 Checksum OK for lammps-lammps-2020.08.24-patch_24Aug2020_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for lammps-2020.08.24
===>  Applying FreeBSD patches for lammps-2020.08.24 from /usr/ports/science/lammps/files
===========================================================================
=======================<phase: build-depends  >============================
===>   lammps-2020.08.24 depends on executable: ffmpeg - not found
<snip>
/usr/bin/make  -f CMakeFiles/neigh_list.h.dir/build.make CMakeFiles/neigh_list.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/neigh_list.h.dir/DependInfo.cmake
Scanning dependencies of target neigh_list.h
/usr/bin/make  -f CMakeFiles/neigh_list.h.dir/build.make CMakeFiles/neigh_list.h.dir/build
[ 11%] Generating includes/lammps/neigh_list.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/neigh_list.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/neigh_list.h
[ 11%] Built target neigh_list.h
/usr/bin/make  -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/modify.h.dir/DependInfo.cmake
Scanning dependencies of target modify.h
/usr/bin/make  -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/build
[ 11%] Generating includes/lammps/modify.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/modify.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/modify.h
[ 11%] Built target modify.h
/usr/bin/make  -f CMakeFiles/lmptype.h.dir/build.make CMakeFiles/lmptype.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/lmptype.h.dir/DependInfo.cmake
Scanning dependencies of target lmptype.h
/usr/bin/make  -f CMakeFiles/lmptype.h.dir/build.make CMakeFiles/lmptype.h.dir/build
[ 11%] Generating includes/lammps/lmptype.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/lmptype.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/lmptype.h
[ 11%] Built target lmptype.h
/usr/bin/make  -f CMakeFiles/lmppython.h.dir/build.make CMakeFiles/lmppython.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/lmppython.h.dir/DependInfo.cmake
Scanning dependencies of target lmppython.h
/usr/bin/make  -f CMakeFiles/lmppython.h.dir/build.make CMakeFiles/lmppython.h.dir/build
[ 12%] Generating includes/lammps/lmppython.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/lmppython.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/lmppython.h
[ 12%] Built target lmppython.h
/usr/bin/make  -f CMakeFiles/citeme.h.dir/build.make CMakeFiles/citeme.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/citeme.h.dir/DependInfo.cmake
Scanning dependencies of target citeme.h
/usr/bin/make  -f CMakeFiles/citeme.h.dir/build.make CMakeFiles/citeme.h.dir/build
[ 12%] Generating includes/lammps/citeme.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/citeme.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/citeme.h
[ 12%] Built target citeme.h
/usr/bin/make  -f CMakeFiles/kspace.h.dir/build.make CMakeFiles/kspace.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/kspace.h.dir/DependInfo.cmake
Scanning dependencies of target kspace.h
/usr/bin/make  -f CMakeFiles/kspace.h.dir/build.make CMakeFiles/kspace.h.dir/build
[ 12%] Generating includes/lammps/kspace.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/kspace.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/kspace.h
[ 12%] Built target kspace.h
/usr/bin/make  -f CMakeFiles/library.h.dir/build.make CMakeFiles/library.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/library.h.dir/DependInfo.cmake
Scanning dependencies of target library.h
/usr/bin/make  -f CMakeFiles/library.h.dir/build.make CMakeFiles/library.h.dir/build
[ 12%] Generating includes/lammps/library.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/library.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/library.h
[ 12%] Built target library.h
/usr/bin/make  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/variable.h.dir/DependInfo.cmake
Scanning dependencies of target variable.h
/usr/bin/make  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/build
[ 13%] Generating includes/lammps/variable.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/variable.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/variable.h
[ 13%] Built target variable.h
/usr/bin/make  -f CMakeFiles/lammps.h.dir/build.make CMakeFiles/lammps.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/lammps.h.dir/DependInfo.cmake
Scanning dependencies of target lammps.h
/usr/bin/make  -f CMakeFiles/lammps.h.dir/build.make CMakeFiles/lammps.h.dir/build
[ 13%] Generating includes/lammps/lammps.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/lammps.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/lammps.h
[ 13%] Built target lammps.h
/usr/bin/make  -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/pointers.h.dir/DependInfo.cmake
Scanning dependencies of target pointers.h
/usr/bin/make  -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/build
[ 13%] Generating includes/lammps/pointers.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/pointers.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/pointers.h
[ 13%] Built target pointers.h
/usr/bin/make  -f CMakeFiles/info.h.dir/build.make CMakeFiles/info.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/info.h.dir/DependInfo.cmake
Scanning dependencies of target info.h
/usr/bin/make  -f CMakeFiles/info.h.dir/build.make CMakeFiles/info.h.dir/build
[ 13%] Generating includes/lammps/info.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/info.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/info.h
[ 13%] Built target info.h
/usr/bin/make  -f CMakeFiles/fix.h.dir/build.make CMakeFiles/fix.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/fix.h.dir/DependInfo.cmake
Scanning dependencies of target fix.h
/usr/bin/make  -f CMakeFiles/fix.h.dir/build.make CMakeFiles/fix.h.dir/build
[ 13%] Generating includes/lammps/fix.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/fix.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/fix.h
[ 13%] Built target fix.h
/usr/bin/make  -f CMakeFiles/output.h.dir/build.make CMakeFiles/output.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/output.h.dir/DependInfo.cmake
Scanning dependencies of target output.h
/usr/bin/make  -f CMakeFiles/output.h.dir/build.make CMakeFiles/output.h.dir/build
[ 13%] Generating includes/lammps/output.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/output.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/output.h
[ 13%] Built target output.h
/usr/bin/make  -f CMakeFiles/improper.h.dir/build.make CMakeFiles/improper.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/improper.h.dir/DependInfo.cmake
Scanning dependencies of target improper.h
/usr/bin/make  -f CMakeFiles/improper.h.dir/build.make CMakeFiles/improper.h.dir/build
[ 13%] Generating includes/lammps/improper.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/improper.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/improper.h
[ 13%] Built target improper.h
/usr/bin/make  -f CMakeFiles/error.h.dir/build.make CMakeFiles/error.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/error.h.dir/DependInfo.cmake
Scanning dependencies of target error.h
/usr/bin/make  -f CMakeFiles/error.h.dir/build.make CMakeFiles/error.h.dir/build
[ 13%] Generating includes/lammps/error.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/error.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/error.h
[ 13%] Built target error.h
/usr/bin/make  -f CMakeFiles/compute.h.dir/build.make CMakeFiles/compute.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/compute.h.dir/DependInfo.cmake
Scanning dependencies of target compute.h
/usr/bin/make  -f CMakeFiles/compute.h.dir/build.make CMakeFiles/compute.h.dir/build
[ 14%] Generating includes/lammps/compute.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/compute.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/compute.h
[ 14%] Built target compute.h
/usr/bin/make  -f CMakeFiles/timer.h.dir/build.make CMakeFiles/timer.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/timer.h.dir/DependInfo.cmake
Scanning dependencies of target timer.h
/usr/bin/make  -f CMakeFiles/timer.h.dir/build.make CMakeFiles/timer.h.dir/build
[ 14%] Generating includes/lammps/timer.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/timer.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/timer.h
[ 14%] Built target timer.h
/usr/bin/make  -f CMakeFiles/comm.h.dir/build.make CMakeFiles/comm.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/comm.h.dir/DependInfo.cmake
Scanning dependencies of target comm.h
/usr/bin/make  -f CMakeFiles/comm.h.dir/build.make CMakeFiles/comm.h.dir/build
[ 14%] Generating includes/lammps/comm.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/comm.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/comm.h
[ 14%] Built target comm.h
/usr/bin/make  -f CMakeFiles/bond.h.dir/build.make CMakeFiles/bond.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/bond.h.dir/DependInfo.cmake
Scanning dependencies of target bond.h
/usr/bin/make  -f CMakeFiles/bond.h.dir/build.make CMakeFiles/bond.h.dir/build
[ 14%] Generating includes/lammps/bond.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/bond.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/bond.h
[ 14%] Built target bond.h
/usr/bin/make  -f CMakeFiles/input.h.dir/build.make CMakeFiles/input.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/input.h.dir/DependInfo.cmake
Scanning dependencies of target input.h
/usr/bin/make  -f CMakeFiles/input.h.dir/build.make CMakeFiles/input.h.dir/build
[ 14%] Generating includes/lammps/input.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/input.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/input.h
[ 14%] Built target input.h
/usr/bin/make  -f CMakeFiles/atom.h.dir/build.make CMakeFiles/atom.h.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/atom.h.dir/DependInfo.cmake
Scanning dependencies of target atom.h
/usr/bin/make  -f CMakeFiles/atom.h.dir/build.make CMakeFiles/atom.h.dir/build
[ 14%] Generating includes/lammps/atom.h
/usr/local/bin/cmake -E copy_if_different /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/atom.h /wrkdirs/usr/ports/science/lammps/work/.build/includes/lammps/atom.h
[ 14%] Built target atom.h
/usr/bin/make  -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
cd /wrkdirs/usr/ports/science/lammps/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/cmake /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build /wrkdirs/usr/ports/science/lammps/work/.build/CMakeFiles/lammps.dir/DependInfo.cmake
Scanning dependencies of target lammps
/usr/bin/make  -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
[ 14%] Building CXX object CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_EXCEPTIONS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=3 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_KIM_CURL -DLMP_KOKKOS -DLMP_MPIIO -Dlammps_EXPORTS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/message/cslib/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/ASPHERE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/BODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/CLASS2 -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COLLOID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COMPRESS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/DIPOLE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/GRANULAR -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KSPACE -I/wrkdirs/usr/ports
 /science/lammps/work/lammps-patch_24Aug2020/src/LATTE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MANYBODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MESSAGE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MOLECULE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/PERI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/POEMS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/QEQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/REPLICA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/RIGID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SHOCK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SPIN -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch
 _24Aug2020/src/SNAP -I/wrkdirs/usr/ports/sci!
 ence/lammps/work/lammps-patch_24Aug2020/src/SRD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KIM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MPIIO -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/VORONOI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-ATC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-AWPMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-BOCS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGDNA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MESODPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGSDK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-COLVARS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DIFFRACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DPD -I/wrkdirs/
 usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DRUDE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-EFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-FEP -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-H5MD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-LB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MANIFOLD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MEAMC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MGPT -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOFFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOLFILE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-PHONON -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/
 src/USER-PLUMED -I/wrkdirs/usr/ports/science!
 /lammps/w!
 ork/lammps-patch_24Aug2020/src/USER-PTM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QTB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REAXC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SDPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMTBQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SPH -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-TALLY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-UEF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QMMM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-YAFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS -I/wrkdirs/usr/ports/
 science/lammps/work/.build/styles -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars/lepton/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/molfile -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/qmmm -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/poems -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/atc -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/systems/interact -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/ivutils/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/h5md/include -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include/voro++ -isystem /usr/local/include/eigen3 -isystem /usr/local/include/kim-api -isystem /usr/local/lib/kim-api/mod -O2 -pipe -fstack-protector-strong -isystem /usr/local/in
 clude -fno-strict-aliasing  -isystem /usr/lo!
 cal/inclu!
 de -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fexceptions -pthread -fopenmp=libomp -std=c++11 -o CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle.cpp.o -c /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle.cpp
[ 14%] Building CXX object CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_deprecated.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_EXCEPTIONS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=3 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_KIM_CURL -DLMP_KOKKOS -DLMP_MPIIO -Dlammps_EXPORTS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/message/cslib/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/ASPHERE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/BODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/CLASS2 -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COLLOID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COMPRESS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/DIPOLE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/GRANULAR -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KSPACE -I/wrkdirs/usr/ports
 /science/lammps/work/lammps-patch_24Aug2020/src/LATTE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MANYBODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MESSAGE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MOLECULE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/PERI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/POEMS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/QEQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/REPLICA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/RIGID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SHOCK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SPIN -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch
 _24Aug2020/src/SNAP -I/wrkdirs/usr/ports/sci!
 ence/lammps/work/lammps-patch_24Aug2020/src/SRD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KIM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MPIIO -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/VORONOI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-ATC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-AWPMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-BOCS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGDNA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MESODPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGSDK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-COLVARS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DIFFRACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DPD -I/wrkdirs/
 usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DRUDE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-EFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-FEP -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-H5MD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-LB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MANIFOLD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MEAMC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MGPT -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOFFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOLFILE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-PHONON -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/
 src/USER-PLUMED -I/wrkdirs/usr/ports/science!
 /lammps/w!
 ork/lammps-patch_24Aug2020/src/USER-PTM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QTB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REAXC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SDPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMTBQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SPH -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-TALLY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-UEF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QMMM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-YAFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS -I/wrkdirs/usr/ports/
 science/lammps/work/.build/styles -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars/lepton/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/molfile -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/qmmm -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/poems -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/atc -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/systems/interact -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/ivutils/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/h5md/include -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include/voro++ -isystem /usr/local/include/eigen3 -isystem /usr/local/include/kim-api -isystem /usr/local/lib/kim-api/mod -O2 -pipe -fstack-protector-strong -isystem /usr/local/in
 clude -fno-strict-aliasing  -isystem /usr/lo!
 cal/inclu!
 de -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fexceptions -pthread -fopenmp=libomp -std=c++11 -o CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_deprecated.cpp.o -c /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_deprecated.cpp
[ 14%] Building CXX object CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_hybrid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_EXCEPTIONS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=3 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_KIM_CURL -DLMP_KOKKOS -DLMP_MPIIO -Dlammps_EXPORTS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/message/cslib/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/ASPHERE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/BODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/CLASS2 -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COLLOID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COMPRESS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/DIPOLE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/GRANULAR -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KSPACE -I/wrkdirs/usr/ports
 /science/lammps/work/lammps-patch_24Aug2020/src/LATTE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MANYBODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MESSAGE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MOLECULE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/PERI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/POEMS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/QEQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/REPLICA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/RIGID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SHOCK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SPIN -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch
 _24Aug2020/src/SNAP -I/wrkdirs/usr/ports/sci!
 ence/lammps/work/lammps-patch_24Aug2020/src/SRD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KIM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MPIIO -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/VORONOI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-ATC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-AWPMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-BOCS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGDNA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MESODPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGSDK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-COLVARS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DIFFRACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DPD -I/wrkdirs/
 usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DRUDE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-EFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-FEP -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-H5MD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-LB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MANIFOLD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MEAMC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MGPT -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOFFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOLFILE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-PHONON -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/
 src/USER-PLUMED -I/wrkdirs/usr/ports/science!
 /lammps/w!
 ork/lammps-patch_24Aug2020/src/USER-PTM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QTB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REAXC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SDPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMTBQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SPH -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-TALLY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-UEF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QMMM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-YAFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS -I/wrkdirs/usr/ports/
 science/lammps/work/.build/styles -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars/lepton/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/molfile -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/qmmm -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/poems -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/atc -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/systems/interact -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/ivutils/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/h5md/include -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include/voro++ -isystem /usr/local/include/eigen3 -isystem /usr/local/include/kim-api -isystem /usr/local/lib/kim-api/mod -O2 -pipe -fstack-protector-strong -isystem /usr/local/in
 clude -fno-strict-aliasing  -isystem /usr/lo!
 cal/inclu!
 de -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fexceptions -pthread -fopenmp=libomp -std=c++11 -o CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_hybrid.cpp.o -c /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_hybrid.cpp
[ 15%] Building CXX object CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_zero.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_EXCEPTIONS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=3 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_KIM_CURL -DLMP_KOKKOS -DLMP_MPIIO -Dlammps_EXPORTS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/message/cslib/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/ASPHERE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/BODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/CLASS2 -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COLLOID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COMPRESS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/DIPOLE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/GRANULAR -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KSPACE -I/wrkdirs/usr/ports
 /science/lammps/work/lammps-patch_24Aug2020/src/LATTE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MANYBODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MESSAGE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MOLECULE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/PERI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/POEMS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/QEQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/REPLICA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/RIGID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SHOCK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SPIN -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch
 _24Aug2020/src/SNAP -I/wrkdirs/usr/ports/sci!
 ence/lammps/work/lammps-patch_24Aug2020/src/SRD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KIM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MPIIO -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/VORONOI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-ATC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-AWPMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-BOCS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGDNA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MESODPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGSDK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-COLVARS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DIFFRACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DPD -I/wrkdirs/
 usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DRUDE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-EFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-FEP -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-H5MD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-LB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MANIFOLD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MEAMC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MGPT -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOFFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOLFILE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-PHONON -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/
 src/USER-PLUMED -I/wrkdirs/usr/ports/science!
 /lammps/w!
 ork/lammps-patch_24Aug2020/src/USER-PTM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QTB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REAXC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SDPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMTBQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SPH -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-TALLY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-UEF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QMMM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-YAFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS -I/wrkdirs/usr/ports/
 science/lammps/work/.build/styles -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars/lepton/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/molfile -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/qmmm -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/poems -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/atc -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/systems/interact -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/ivutils/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/h5md/include -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include/voro++ -isystem /usr/local/include/eigen3 -isystem /usr/local/include/kim-api -isystem /usr/local/lib/kim-api/mod -O2 -pipe -fstack-protector-strong -isystem /usr/local/in
 clude -fno-strict-aliasing  -isystem /usr/lo!
 cal/inclu!
 de -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fexceptions -pthread -fopenmp=libomp -std=c++11 -o CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_zero.cpp.o -c /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/angle_zero.cpp
[ 15%] Building CXX object CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_EXCEPTIONS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=3 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_KIM_CURL -DLMP_KOKKOS -DLMP_MPIIO -Dlammps_EXPORTS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/message/cslib/src -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/ASPHERE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/BODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/CLASS2 -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COLLOID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/COMPRESS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/DIPOLE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/GRANULAR -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KSPACE -I/wrkdirs/usr/ports
 /science/lammps/work/lammps-patch_24Aug2020/src/LATTE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MANYBODY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MESSAGE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MOLECULE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/PERI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/POEMS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/QEQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/REPLICA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/RIGID -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SHOCK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/SPIN -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch
 _24Aug2020/src/SNAP -I/wrkdirs/usr/ports/sci!
 ence/lammps/work/lammps-patch_24Aug2020/src/SRD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KIM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/MPIIO -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/VORONOI -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-ATC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-AWPMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-BOCS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGDNA -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MESODPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-CGSDK -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-COLVARS -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DIFFRACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DPD -I/wrkdirs/
 usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-DRUDE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-EFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-FEP -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-H5MD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-LB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MANIFOLD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MEAMC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MGPT -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MISC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOFFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-MOLFILE -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-PHONON -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/
 src/USER-PLUMED -I/wrkdirs/usr/ports/science!
 /lammps/w!
 ork/lammps-patch_24Aug2020/src/USER-PTM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QTB -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REACTION -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-REAXC -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SDPD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMD -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SMTBQ -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-SPH -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-TALLY -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-UEF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-QMMM -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/USER-YAFF -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS -I/wrkdirs/usr/ports/
 science/lammps/work/.build/styles -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/colvars/lepton/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/molfile -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/qmmm -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/poems -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/atc -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/systems/interact -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/awpmd/ivutils/include -I/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/lib/h5md/include -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include/voro++ -isystem /usr/local/include/eigen3 -isystem /usr/local/include/kim-api -isystem /usr/local/lib/kim-api/mod -O2 -pipe -fstack-protector-strong -isystem /usr/local/in
 clude -fno-strict-aliasing  -isystem /usr/lo!
 cal/inclu!
 de -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC -fexceptions -pthread -fopenmp=libomp -std=c++11 -o CMakeFiles/lammps.dir/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/atom.cpp.o -c /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/atom.cpp
In file included from /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/atom.cpp:21:
In file included from /wrkdirs/usr/ports/science/lammps/work/.build/styles/style_atom.h:2:
In file included from /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/atom_vec_angle_kokkos.h:25:
In file included from /wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/atom_vec_kokkos.h:18:
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:232:55: error: expected '(' for function-style cast or type construction
  enum {value = Kokkos::Experimental::ScatterNonAtomic};
                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:272:59: error: expected '(' for function-style cast or type construction
  enum {value = Kokkos::Experimental::ScatterNonDuplicated};
                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:297:25: error: template argument for non-type template parameter must be an expression
class ScatterViewHelper<Kokkos::Experimental::ScatterDuplicated,T1,T2> {
                        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:293:14: note: template parameter is declared here
template<int value, typename T1, typename T2>
             ^
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:306:25: error: template argument for non-type template parameter must be an expression
class ScatterViewHelper<Kokkos::Experimental::ScatterNonDuplicated,T1,T2> {
                        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/science/lammps/work/lammps-patch_24Aug2020/src/KOKKOS/kokkos_type.h:293:14: note: template parameter is declared here
template<int value, typename T1, typename T2>
             ^
4 errors generated.
*** Error code 1

Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/lammps/work/.build
*** Error code 1

Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/lammps/work/.build
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/lammps/work/.build
*** Error code 1

Stop.
make: stopped in /usr/ports/science/lammps



Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202009190757.08J7vhfa045345>