Date: Thu, 21 Jan 2021 02:07:07 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r562166 - in head/science: . py-nibabel Message-ID: <202101210207.10L2771P045258@repo.freebsd.org>
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Author: yuri Date: Thu Jan 21 02:07:06 2021 New Revision: 562166 URL: https://svnweb.freebsd.org/changeset/ports/562166 Log: New port: science/py-nibabel: Read/write some common neuroimaging file formats Added: head/science/py-nibabel/ head/science/py-nibabel/Makefile (contents, props changed) head/science/py-nibabel/distinfo (contents, props changed) head/science/py-nibabel/pkg-descr (contents, props changed) Modified: head/science/Makefile Modified: head/science/Makefile ============================================================================== --- head/science/Makefile Thu Jan 21 00:49:04 2021 (r562165) +++ head/science/Makefile Thu Jan 21 02:07:06 2021 (r562166) @@ -255,6 +255,7 @@ SUBDIR += py-moltemplate SUBDIR += py-netCDF4 SUBDIR += py-netcdf-flattener + SUBDIR += py-nibabel SUBDIR += py-obspy SUBDIR += py-oddt SUBDIR += py-openpiv Added: head/science/py-nibabel/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/py-nibabel/Makefile Thu Jan 21 02:07:06 2021 (r562166) @@ -0,0 +1,23 @@ +# $FreeBSD$ + +PORTNAME= nibabel +DISTVERSION= 3.2.1 +CATEGORIES= science python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Read/write some common neuroimaging file formats + +LICENSE= MIT +LICENSE_FILE= ${WRKSRC}/COPYING + +RUN_DEPENDS= ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}packaging>0:devel/py-packaging@${PY_FLAVOR} + +USES= python:3.6+ +USE_PYTHON= distutils concurrent autoplist + +NO_ARCH= yes + +.include <bsd.port.mk> Added: head/science/py-nibabel/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/py-nibabel/distinfo Thu Jan 21 02:07:06 2021 (r562166) @@ -0,0 +1,3 @@ +TIMESTAMP = 1611194236 +SHA256 (nibabel-3.2.1.tar.gz) = 4d2ff9426b740011a1c916b54fc25da9348282e727eaa2ea163f42e00f1fc29e +SIZE (nibabel-3.2.1.tar.gz) = 4723111 Added: head/science/py-nibabel/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/py-nibabel/pkg-descr Thu Jan 21 02:07:06 2021 (r562166) @@ -0,0 +1,11 @@ +This package provides read +/- write access to some common medical and +neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), +GIFTI, NIfTI1, NIfTI2, CIFTI-2, MINC1, MINC2, AFNI BRIK/HEAD, MGH and ECAT as +well as Philips PAR/REC. We can read and write FreeSurfer geometry, annotation +and morphometry files. There is some very limited support for DICOM. NiBabel is +the successor of PyNIfTI. + +The various image format classes give full or selective access to header (meta) +information and access to the image data is made available via NumPy arrays. + +WWW: https://nipy.org/nibabel/
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