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Date:      Thu, 6 Dec 2018 15:42:52 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 120powerpc64-quarterly][biology/hmmer] Failed for hmmer-3.2.1 in build
Message-ID:  <201812061542.wB6FgqwR058130@pylon.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     mzaki@niid.go.jp
Last committer: swills@FreeBSD.org
Ident:          $FreeBSD: branches/2018Q4/biology/hmmer/Makefile 474455 2018-07-11 15:15:03Z swills $
Log URL:        http://pylon.nyi.freebsd.org/data/120powerpc64-quarterly/486760/logs/hmmer-3.2.1.log
Build URL:      http://pylon.nyi.freebsd.org/build.html?mastername=120powerpc64-quarterly&build=486760
Log:

=>> Building biology/hmmer
build started at Thu Dec  6 15:42:18 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.2.1
building for: FreeBSD 120powerpc64-quarterly-job-05 12.0-RC3 FreeBSD 12.0-RC3 1200086 powerpc
maintained by: mzaki@niid.go.jp
Makefile ident:      $FreeBSD: branches/2018Q4/biology/hmmer/Makefile 474455 2018-07-11 15:15:03Z swills $
Poudriere version: 3.2.8
Host OSVERSION: 1300004
Jail OSVERSION: 1200086
Job Id: 05

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200086
UNAME_v=FreeBSD 12.0-RC3 1200086
UNAME_r=12.0-RC3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8
MASTERMNT=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=vt100
PWD=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=120powerpc64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/120powerpc64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.2.1:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
     TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mzaki@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing  "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.26.2  PERL_VER=5.26  PERL5_MAN1=lib/perl5/site_perl/man/man1  PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  SITE_ARCH=lib/perl5/site_perl/mach/5.26 DOCSDIR="share/doc/hmmer"  EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=	true
.endif
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=Using built-in specs. Target: powerpc64-undermydesk-freebsd Configured with: FreeBSD/powerpc64 system compiler Thread model: posix gcc version 4.2.1 20070831 patched [FreeBSD] "/usr/bin/ld" "--eh-frame-hdr" "-Qy" "-melf64ppc_fbsd" "--enable-new-dtags" "-dynamic-linker" "/libexec/ld-elf.so.1" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "-L/usr/lib" "/dev/null" "-lstdc++" "-lm" "-lgcc_s" "-lgcc" "-lc" "-lgcc_s" "-lgcc" "/usr/lib/crtsavres.o" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=cc1: error: unrecognized command line option "-std=c11"
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=cc1: error: unrecognized command line option "-std=gnu11"
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=cc1plus: error: unrecognized command line option "-std=c++0x"
CC_OUTPUT_921dbbb2_f00456e5=cc1plus: error: unrecognized command line option "-std=c++11"
CC_OUTPUT_921dbbb2_65ad290d=cc1plus: error: unrecognized command line option "-std=c++14"
CC_OUTPUT_921dbbb2_f2776b26=cc1plus: error: unrecognized command line option "-std=c++17"
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=cc1plus: error: unrecognized command line option "-std=gnu++11"
CC_OUTPUT_921dbbb2_160933ec=cc1plus: error: unrecognized command line option "-std=gnu++14"
CC_OUTPUT_921dbbb2_fb62803b=cc1plus: error: unrecognized command line option "-std=gnu++17"
_OBJC_CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=powerpc64
OPSYS=FreeBSD
_OSRELEASE=12.0-RC3
OSREL=12.0
OSVERSION=1200086
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=262144
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  19544
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   hmmer-3.2.1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5_5.txz
[120powerpc64-quarterly-job-05] Installing pkg-1.10.5_5...
[120powerpc64-quarterly-job-05] Extracting pkg-1.10.5_5: .......... done
===>   hmmer-3.2.1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of hmmer-3.2.1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by hmmer-3.2.1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by hmmer-3.2.1 for building
=> SHA256 Checksum OK for hmmer-3.2.1.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by hmmer-3.2.1 for building
===>  Extracting for hmmer-3.2.1
=> SHA256 Checksum OK for hmmer-3.2.1.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for hmmer-3.2.1
===========================================================================
=======================<phase: build-depends  >============================
===>   hmmer-3.2.1 depends on executable: gmake - not found
===>   Installing existing package /packages/All/gmake-4.2.1_2.txz
[120powerpc64-quarterly-job-05] Installing gmake-4.2.1_2...
[120powerpc64-quarterly-job-05] `-- Installing gettext-runtime-0.19.8.1_1...
[120powerpc64-quarterly-job-05] |   `-- Installing indexinfo-0.3.1...
[120powerpc64-quarterly-job-05] |   `-- Extracting indexinfo-0.3.1: .... done
[120powerpc64-quarterly-job-05] `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[120powerpc64-quarterly-job-05] Extracting gmake-4.2.1_2: .......... done
===>   hmmer-3.2.1 depends on executable: gmake - found
===>   Returning to build of hmmer-3.2.1
<snip>
checking for uint64_t... (cached) yes
checking for off_t... (cached) yes
checking whether byte ordering is bigendian... yes
checking for __attribute__((noreturn))... yes
checking for __attribute__((format))... yes
checking for mkstemp... (cached) yes
checking for popen... yes
checking for putenv... (cached) yes
checking for strcasecmp... (cached) yes
checking for strsep... (cached) yes
checking for times... (cached) yes
checking for getpid... (cached) yes
checking for sysctl... (cached) yes
checking for sysconf... (cached) yes
checking for getcwd... (cached) yes
checking for chmod... yes
checking for stat... (cached) yes
checking for fstat... (cached) yes
checking for erfc... no
checking for library containing ntohs... none required
checking for library containing ntohl... none required
checking for library containing htons... none required
checking for library containing htonl... none required
checking for library containing socket... none required
checking for library containing inet_pton... none required
checking for _LARGEFILE_SOURCE value needed for large files... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating testsuite/Makefile
config.status: creating profmark/Makefile
config.status: creating src/impl_vmx/Makefile
config.status: creating documentation/Makefile
config.status: creating documentation/man/Makefile
config.status: creating documentation/userguide/Makefile
config.status: creating libdivsufsort/Makefile
config.status: creating easel/Makefile
config.status: creating easel/miniapps/Makefile
config.status: creating easel/testsuite/Makefile
config.status: creating easel/documentation/Makefile
config.status: creating documentation/userguide/titlepage.tex
config.status: creating documentation/userguide/copyright.tex
config.status: creating documentation/man/alimask.man
config.status: creating documentation/man/hmmalign.man
config.status: creating documentation/man/hmmbuild.man
config.status: creating documentation/man/hmmconvert.man
config.status: creating documentation/man/hmmemit.man
config.status: creating documentation/man/hmmer.man
config.status: creating documentation/man/hmmfetch.man
config.status: creating documentation/man/hmmlogo.man
config.status: creating documentation/man/hmmpgmd.man
config.status: creating documentation/man/hmmpress.man
config.status: creating documentation/man/hmmscan.man
config.status: creating documentation/man/hmmsearch.man
config.status: creating documentation/man/hmmsim.man
config.status: creating documentation/man/hmmstat.man
config.status: creating documentation/man/jackhmmer.man
config.status: creating documentation/man/makehmmerdb.man
config.status: creating documentation/man/nhmmer.man
config.status: creating documentation/man/nhmmscan.man
config.status: creating documentation/man/phmmer.man
config.status: creating easel/miniapps/esl-afetch.man
config.status: creating easel/miniapps/esl-alimanip.man
config.status: creating easel/miniapps/esl-alimap.man
config.status: creating easel/miniapps/esl-alimask.man
config.status: creating easel/miniapps/esl-alimerge.man
config.status: creating easel/miniapps/esl-alipid.man
config.status: creating easel/miniapps/esl-alirev.man
config.status: creating easel/miniapps/esl-alistat.man
config.status: creating easel/miniapps/esl-compalign.man
config.status: creating easel/miniapps/esl-compstruct.man
config.status: creating easel/miniapps/esl-construct.man
config.status: creating easel/miniapps/esl-histplot.man
config.status: creating easel/miniapps/esl-mask.man
config.status: creating easel/miniapps/esl-reformat.man
config.status: creating easel/miniapps/esl-selectn.man
config.status: creating easel/miniapps/esl-seqrange.man
config.status: creating easel/miniapps/esl-seqstat.man
config.status: creating easel/miniapps/esl-sfetch.man
config.status: creating easel/miniapps/esl-shuffle.man
config.status: creating easel/miniapps/esl-ssdraw.man
config.status: creating easel/miniapps/esl-translate.man
config.status: creating easel/miniapps/esl-weight.man
config.status: creating easel/decoy_config.h
config.status: creating src/p7_config.h
config.status: creating easel/esl_config.h
config.status: creating libdivsufsort/divsufsort.h
config.status: linking src/impl_vmx to src/impl


HMMER configuration:
     compiler:             cc -std=gnu99 -O2 -pipe  -fno-strict-aliasing   -maltivec -pthread
     host:                 powerpc64-portbld-freebsd12.0
     linker:                
     libraries:              
     DP implementation:    vmx

Do 'make'  to build HMMER, and optionally:
   'make check'  to run self tests,
   'make install'  to install programs and man pages,
   '(cd easel; make install)'  to install Easel tools.

===========================================================================
=======================<phase: build          >============================
===>  Building for hmmer-3.2.1
gmake[1]: Entering directory '/wrkdirs/usr/ports/biology/hmmer/work/hmmer-3.2.1'
gmake -C easel      all
gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/hmmer/work/hmmer-3.2.1/easel'
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c easel.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_alloc.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_alphabet.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_arr2.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_arr3.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_buffer.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_cluster.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_composition.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_cpu.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_dirichlet.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_distance.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_dmatrix.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_dsqdata.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_exponential.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_fileparser.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_gamma.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_gencode.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_getopts.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_gev.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_gumbel.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_heap.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_histogram.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_hmm.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_huffman.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_hyperexp.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_keyhash.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_mem.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_minimizer.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_mixgev.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_mpi.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msa.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msacluster.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile2.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_a2m.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_afa.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_clustal.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_phylip.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_psiblast.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_selex.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msafile_stockholm.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msashuffle.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_msaweight.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_normal.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_paml.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_quicksort.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_random.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_randomseq.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_ratematrix.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_recorder.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_red_black.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_regexp.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_rootfinder.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_scorematrix.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_sq.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_sqio.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_sqio_ascii.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_sqio_ncbi.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_ssi.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_stack.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_stats.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_stopwatch.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_stretchexp.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_threads.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_tree.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_vectorops.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_weibull.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_workqueue.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_wuss.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_sse.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_avx.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_avx512.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread    -c esl_neon.c
cc -std=gnu99 -I. -I. -O2 -pipe  -fno-strict-aliasing   -pthread  -maltivec  -c esl_vmx.c
In file included from esl_vmx.c:43:
esl_vmx.h: In function 'esl_vmx_set_float':
esl_vmx.h:30: warning: implicit declaration of function 'vec_splats'
esl_vmx.h:30: error: incompatible types in assignment
esl_vmx.h: In function 'esl_vmx_set_s16':
esl_vmx.h:48: error: incompatible types in assignment
esl_vmx.h: In function 'esl_vmx_set_u8':
esl_vmx.h:66: error: incompatible types in assignment
gmake[2]: *** [Makefile:522: esl_vmx.o] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/hmmer/work/hmmer-3.2.1/easel'
gmake[1]: *** [Makefile:90: all] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/hmmer/work/hmmer-3.2.1'
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/hmmer



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