Date: Sat, 28 Aug 2021 04:53:48 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 5f8880a8d77f - main - math/stanmath: New port: C++ template library for automatic differentiation Message-ID: <202108280453.17S4rmfp055519@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=5f8880a8d77fd067dc6c6cc4d4a02432ac243d95 commit 5f8880a8d77fd067dc6c6cc4d4a02432ac243d95 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2021-08-28 03:39:48 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2021-08-28 04:53:40 +0000 math/stanmath: New port: C++ template library for automatic differentiation --- math/Makefile | 1 + math/stanmath/Makefile | 35 + math/stanmath/distinfo | 3 + math/stanmath/files/patch-make_compiler__flags | 14 + math/stanmath/files/patch-runTests.py | 11 + math/stanmath/pkg-descr | 6 + math/stanmath/pkg-plist | 1769 ++++++++++++++++++++++++ 7 files changed, 1839 insertions(+) diff --git a/math/Makefile b/math/Makefile index 8808a991f921..2aaeadaa7c07 100644 --- a/math/Makefile +++ b/math/Makefile @@ -987,6 +987,7 @@ SUBDIR += spooles-mpich SUBDIR += spot SUBDIR += sprng + SUBDIR += stanmath SUBDIR += stp SUBDIR += suitesparse SUBDIR += suitesparse-amd diff --git a/math/stanmath/Makefile b/math/stanmath/Makefile new file mode 100644 index 000000000000..f1943a28517c --- /dev/null +++ b/math/stanmath/Makefile @@ -0,0 +1,35 @@ +PORTNAME= stanmath +DISTVERSIONPREFIX= v +DISTVERSION= 4.1.0 +CATEGORIES= math + +MAINTAINER= yuri@FreeBSD.org +COMMENT= C++ template library for automatic differentiation + +LICENSE= BSD3CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE.md + +RUN_DEPENDS= ${LOCALBASE}/include/boost/math/constants/constants.hpp:devel/boost-libs \ + ${LOCALBASE}/include/tbb/task_arena.h:devel/onetbb # compiler define -DTBB_INTERFACE_NEW chooses oneTBB as opposed to TBB +TEST_DEPENDS= gmake:devel/gmake + +USES= eigen:3,run, python:test shebangfix + +USE_GITHUB= yes +GH_ACCOUNT= stan-dev +GH_PROJECT= math + +SHEBANG_FILES= runTests.py + +MAKE_ENV= TBB_LIB="${LOCALBASE}/lib" + +NO_BUILD= yes +NO_ARCH= yes + +do-install: + @cd ${WRKSRC} && ${COPYTREE_SHARE} stan ${STAGEDIR}${PREFIX}/include + +do-test: # fail to compile: https://github.com/stan-dev/math/issues/2571 + @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ./runTests.py test/unit test/prob + +.include <bsd.port.mk> diff --git a/math/stanmath/distinfo b/math/stanmath/distinfo new file mode 100644 index 000000000000..2ee48ed4f9c4 --- /dev/null +++ b/math/stanmath/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1630043342 +SHA256 (stan-dev-math-v4.1.0_GH0.tar.gz) = f526be5f24864f256409ae5e4a17a5858e762a23c329d615a0709cd3935197ba +SIZE (stan-dev-math-v4.1.0_GH0.tar.gz) = 28210482 diff --git a/math/stanmath/files/patch-make_compiler__flags b/math/stanmath/files/patch-make_compiler__flags new file mode 100644 index 000000000000..4bb3e44294c9 --- /dev/null +++ b/math/stanmath/files/patch-make_compiler__flags @@ -0,0 +1,14 @@ +--- make/compiler_flags.orig 2021-08-28 03:13:59 UTC ++++ make/compiler_flags +@@ -274,9 +274,9 @@ LDLIBS_TBB ?= $(LDFLAGS_TBB) + + endif + +-ifdef TBB_INTERFACE_NEW ++#ifdef TBB_INTERFACE_NEW + CPPFLAGS_TBB ?= -DTBB_INTERFACE_NEW +-endif ++#endif + + ################################################################################ + # Setup STAN_THREADS diff --git a/math/stanmath/files/patch-runTests.py b/math/stanmath/files/patch-runTests.py new file mode 100644 index 000000000000..19b25694039f --- /dev/null +++ b/math/stanmath/files/patch-runTests.py @@ -0,0 +1,11 @@ +--- runTests.py.orig 2021-08-28 03:33:35 UTC ++++ runTests.py +@@ -172,7 +172,7 @@ def generateTests(j): + if isWin(): + doCommand("mingw32-make -j%d generate-tests -s" % (j or 1)) + else: +- doCommand("make -j%d generate-tests -s" % (j or 1)) ++ doCommand("gmake -j%d generate-tests -s" % (j or 1)) + + + def divide_chunks(l, n): diff --git a/math/stanmath/pkg-descr b/math/stanmath/pkg-descr new file mode 100644 index 000000000000..0f31dbb73343 --- /dev/null +++ b/math/stanmath/pkg-descr @@ -0,0 +1,6 @@ +The Stan Math Library is a C++, reverse-mode automatic differentiation library +designed to be usable, extensive and extensible, efficient, scalable, stable, +portable, and redistributable in order to facilitate the construction and +utilization of algorithms that utilize derivatives. + +WWW: https://mc-stan.org/math/ diff --git a/math/stanmath/pkg-plist b/math/stanmath/pkg-plist new file mode 100644 index 000000000000..ff623f8798b6 --- /dev/null +++ b/math/stanmath/pkg-plist @@ -0,0 +1,1769 @@ +include/stan/math.hpp +include/stan/math/fwd.hpp +include/stan/math/fwd/core.hpp +include/stan/math/fwd/core/fvar.hpp +include/stan/math/fwd/core/operator_addition.hpp +include/stan/math/fwd/core/operator_division.hpp +include/stan/math/fwd/core/operator_equal.hpp +include/stan/math/fwd/core/operator_greater_than.hpp +include/stan/math/fwd/core/operator_greater_than_or_equal.hpp +include/stan/math/fwd/core/operator_less_than.hpp +include/stan/math/fwd/core/operator_less_than_or_equal.hpp +include/stan/math/fwd/core/operator_logical_and.hpp +include/stan/math/fwd/core/operator_logical_or.hpp +include/stan/math/fwd/core/operator_multiplication.hpp +include/stan/math/fwd/core/operator_not_equal.hpp +include/stan/math/fwd/core/operator_subtraction.hpp +include/stan/math/fwd/core/operator_unary_minus.hpp +include/stan/math/fwd/core/operator_unary_not.hpp +include/stan/math/fwd/core/operator_unary_plus.hpp +include/stan/math/fwd/core/std_complex.hpp +include/stan/math/fwd/core/std_iterator_traits.hpp +include/stan/math/fwd/core/std_numeric_limits.hpp +include/stan/math/fwd/fun.hpp +include/stan/math/fwd/fun/Eigen_NumTraits.hpp +include/stan/math/fwd/fun/Phi.hpp +include/stan/math/fwd/fun/Phi_approx.hpp +include/stan/math/fwd/fun/abs.hpp +include/stan/math/fwd/fun/acos.hpp +include/stan/math/fwd/fun/acosh.hpp +include/stan/math/fwd/fun/arg.hpp +include/stan/math/fwd/fun/asin.hpp +include/stan/math/fwd/fun/asinh.hpp +include/stan/math/fwd/fun/atan.hpp +include/stan/math/fwd/fun/atan2.hpp +include/stan/math/fwd/fun/atanh.hpp +include/stan/math/fwd/fun/bessel_first_kind.hpp +include/stan/math/fwd/fun/bessel_second_kind.hpp +include/stan/math/fwd/fun/beta.hpp +include/stan/math/fwd/fun/binary_log_loss.hpp +include/stan/math/fwd/fun/cbrt.hpp +include/stan/math/fwd/fun/ceil.hpp +include/stan/math/fwd/fun/conj.hpp +include/stan/math/fwd/fun/cos.hpp +include/stan/math/fwd/fun/cosh.hpp +include/stan/math/fwd/fun/determinant.hpp +include/stan/math/fwd/fun/digamma.hpp +include/stan/math/fwd/fun/erf.hpp +include/stan/math/fwd/fun/erfc.hpp +include/stan/math/fwd/fun/exp.hpp +include/stan/math/fwd/fun/exp2.hpp +include/stan/math/fwd/fun/expm1.hpp +include/stan/math/fwd/fun/fabs.hpp +include/stan/math/fwd/fun/falling_factorial.hpp +include/stan/math/fwd/fun/fdim.hpp +include/stan/math/fwd/fun/floor.hpp +include/stan/math/fwd/fun/fma.hpp +include/stan/math/fwd/fun/fmax.hpp +include/stan/math/fwd/fun/fmin.hpp +include/stan/math/fwd/fun/fmod.hpp +include/stan/math/fwd/fun/gamma_p.hpp +include/stan/math/fwd/fun/gamma_q.hpp +include/stan/math/fwd/fun/grad_inc_beta.hpp +include/stan/math/fwd/fun/hypot.hpp +include/stan/math/fwd/fun/inc_beta.hpp +include/stan/math/fwd/fun/inv.hpp +include/stan/math/fwd/fun/inv_Phi.hpp +include/stan/math/fwd/fun/inv_cloglog.hpp +include/stan/math/fwd/fun/inv_logit.hpp +include/stan/math/fwd/fun/inv_sqrt.hpp +include/stan/math/fwd/fun/inv_square.hpp +include/stan/math/fwd/fun/inverse.hpp +include/stan/math/fwd/fun/is_inf.hpp +include/stan/math/fwd/fun/is_nan.hpp +include/stan/math/fwd/fun/lambert_w.hpp +include/stan/math/fwd/fun/lbeta.hpp +include/stan/math/fwd/fun/ldexp.hpp +include/stan/math/fwd/fun/lgamma.hpp +include/stan/math/fwd/fun/lmgamma.hpp +include/stan/math/fwd/fun/log.hpp +include/stan/math/fwd/fun/log10.hpp +include/stan/math/fwd/fun/log1m.hpp +include/stan/math/fwd/fun/log1m_exp.hpp +include/stan/math/fwd/fun/log1m_inv_logit.hpp +include/stan/math/fwd/fun/log1p.hpp +include/stan/math/fwd/fun/log1p_exp.hpp +include/stan/math/fwd/fun/log2.hpp +include/stan/math/fwd/fun/log_determinant.hpp +include/stan/math/fwd/fun/log_diff_exp.hpp +include/stan/math/fwd/fun/log_falling_factorial.hpp +include/stan/math/fwd/fun/log_inv_logit.hpp +include/stan/math/fwd/fun/log_inv_logit_diff.hpp +include/stan/math/fwd/fun/log_mix.hpp +include/stan/math/fwd/fun/log_rising_factorial.hpp +include/stan/math/fwd/fun/log_softmax.hpp +include/stan/math/fwd/fun/log_sum_exp.hpp +include/stan/math/fwd/fun/logit.hpp +include/stan/math/fwd/fun/mdivide_left.hpp +include/stan/math/fwd/fun/mdivide_left_ldlt.hpp +include/stan/math/fwd/fun/mdivide_left_tri_low.hpp +include/stan/math/fwd/fun/mdivide_right.hpp +include/stan/math/fwd/fun/mdivide_right_tri_low.hpp +include/stan/math/fwd/fun/modified_bessel_first_kind.hpp +include/stan/math/fwd/fun/modified_bessel_second_kind.hpp +include/stan/math/fwd/fun/multiply.hpp +include/stan/math/fwd/fun/multiply_log.hpp +include/stan/math/fwd/fun/multiply_lower_tri_self_transpose.hpp +include/stan/math/fwd/fun/norm.hpp +include/stan/math/fwd/fun/owens_t.hpp +include/stan/math/fwd/fun/polar.hpp +include/stan/math/fwd/fun/pow.hpp +include/stan/math/fwd/fun/primitive_value.hpp +include/stan/math/fwd/fun/proj.hpp +include/stan/math/fwd/fun/quad_form.hpp +include/stan/math/fwd/fun/quad_form_sym.hpp +include/stan/math/fwd/fun/read_fvar.hpp +include/stan/math/fwd/fun/rising_factorial.hpp +include/stan/math/fwd/fun/round.hpp +include/stan/math/fwd/fun/sin.hpp +include/stan/math/fwd/fun/sinh.hpp +include/stan/math/fwd/fun/softmax.hpp +include/stan/math/fwd/fun/sqrt.hpp +include/stan/math/fwd/fun/square.hpp +include/stan/math/fwd/fun/sum.hpp +include/stan/math/fwd/fun/tan.hpp +include/stan/math/fwd/fun/tanh.hpp +include/stan/math/fwd/fun/tcrossprod.hpp +include/stan/math/fwd/fun/tgamma.hpp +include/stan/math/fwd/fun/to_fvar.hpp +include/stan/math/fwd/fun/trace_quad_form.hpp +include/stan/math/fwd/fun/trigamma.hpp +include/stan/math/fwd/fun/trunc.hpp +include/stan/math/fwd/fun/typedefs.hpp +include/stan/math/fwd/fun/unit_vector_constrain.hpp +include/stan/math/fwd/fun/value_of.hpp +include/stan/math/fwd/fun/value_of_rec.hpp +include/stan/math/fwd/functor.hpp +include/stan/math/fwd/functor/apply_scalar_unary.hpp +include/stan/math/fwd/functor/gradient.hpp +include/stan/math/fwd/functor/hessian.hpp +include/stan/math/fwd/functor/jacobian.hpp +include/stan/math/fwd/functor/operands_and_partials.hpp +include/stan/math/fwd/functor/reduce_sum.hpp +include/stan/math/fwd/meta.hpp +include/stan/math/fwd/meta/is_fvar.hpp +include/stan/math/fwd/meta/partials_type.hpp +include/stan/math/memory/stack_alloc.hpp +include/stan/math/mix.hpp +include/stan/math/mix/fun.hpp +include/stan/math/mix/fun/typedefs.hpp +include/stan/math/mix/functor.hpp +include/stan/math/mix/functor/derivative.hpp +include/stan/math/mix/functor/finite_diff_grad_hessian.hpp +include/stan/math/mix/functor/finite_diff_grad_hessian_auto.hpp +include/stan/math/mix/functor/grad_hessian.hpp +include/stan/math/mix/functor/grad_tr_mat_times_hessian.hpp +include/stan/math/mix/functor/gradient_dot_vector.hpp +include/stan/math/mix/functor/hessian.hpp +include/stan/math/mix/functor/hessian_times_vector.hpp +include/stan/math/mix/functor/partial_derivative.hpp +include/stan/math/mix/meta.hpp +include/stan/math/opencl/buffer_types.hpp +include/stan/math/opencl/cholesky_decompose.hpp +include/stan/math/opencl/copy.hpp +include/stan/math/opencl/err.hpp +include/stan/math/opencl/err/check_mat_size_one.hpp +include/stan/math/opencl/err/check_opencl.hpp +include/stan/math/opencl/err/check_symmetric.hpp +include/stan/math/opencl/err/check_triangular.hpp +include/stan/math/opencl/is_constant.hpp +include/stan/math/opencl/kernel_cl.hpp +include/stan/math/opencl/kernel_generator.hpp +include/stan/math/opencl/kernel_generator/append.hpp +include/stan/math/opencl/kernel_generator/as_column_vector_or_scalar.hpp +include/stan/math/opencl/kernel_generator/as_operation_cl.hpp +include/stan/math/opencl/kernel_generator/binary_operation.hpp +include/stan/math/opencl/kernel_generator/block_zero_based.hpp +include/stan/math/opencl/kernel_generator/broadcast.hpp +include/stan/math/opencl/kernel_generator/calc_if.hpp +include/stan/math/opencl/kernel_generator/cast.hpp +include/stan/math/opencl/kernel_generator/check_cl.hpp +include/stan/math/opencl/kernel_generator/colwise_reduction.hpp +include/stan/math/opencl/kernel_generator/common_return_scalar.hpp +include/stan/math/opencl/kernel_generator/compound_assignments.hpp +include/stan/math/opencl/kernel_generator/constant.hpp +include/stan/math/opencl/kernel_generator/diagonal.hpp +include/stan/math/opencl/kernel_generator/elt_function_cl.hpp +include/stan/math/opencl/kernel_generator/evaluate_into.hpp +include/stan/math/opencl/kernel_generator/get_kernel_source_for_evaluating_into.hpp +include/stan/math/opencl/kernel_generator/holder_cl.hpp +include/stan/math/opencl/kernel_generator/index.hpp +include/stan/math/opencl/kernel_generator/indexing.hpp +include/stan/math/opencl/kernel_generator/load.hpp +include/stan/math/opencl/kernel_generator/matrix_cl_conversion.hpp +include/stan/math/opencl/kernel_generator/matrix_vector_multiply.hpp +include/stan/math/opencl/kernel_generator/multi_result_kernel.hpp +include/stan/math/opencl/kernel_generator/name_generator.hpp +include/stan/math/opencl/kernel_generator/opencl_code.hpp +include/stan/math/opencl/kernel_generator/operation_cl.hpp +include/stan/math/opencl/kernel_generator/operation_cl_lhs.hpp +include/stan/math/opencl/kernel_generator/optional_broadcast.hpp +include/stan/math/opencl/kernel_generator/reduction_2d.hpp +include/stan/math/opencl/kernel_generator/rowwise_reduction.hpp +include/stan/math/opencl/kernel_generator/scalar.hpp +include/stan/math/opencl/kernel_generator/select.hpp +include/stan/math/opencl/kernel_generator/transpose.hpp +include/stan/math/opencl/kernel_generator/type_str.hpp +include/stan/math/opencl/kernel_generator/unary_operation_cl.hpp +include/stan/math/opencl/kernels/add.hpp +include/stan/math/opencl/kernels/batch_identity.hpp +include/stan/math/opencl/kernels/categorical_logit_glm_lpmf.hpp +include/stan/math/opencl/kernels/check_symmetric.hpp +include/stan/math/opencl/kernels/cholesky_decompose.hpp +include/stan/math/opencl/kernels/device_functions/Phi.hpp +include/stan/math/opencl/kernels/device_functions/Phi_approx.hpp +include/stan/math/opencl/kernels/device_functions/beta.hpp +include/stan/math/opencl/kernels/device_functions/binomial_coefficient_log.hpp +include/stan/math/opencl/kernels/device_functions/digamma.hpp +include/stan/math/opencl/kernels/device_functions/inv_Phi.hpp +include/stan/math/opencl/kernels/device_functions/inv_logit.hpp +include/stan/math/opencl/kernels/device_functions/inv_square.hpp +include/stan/math/opencl/kernels/device_functions/lbeta.hpp +include/stan/math/opencl/kernels/device_functions/lgamma_stirling.hpp +include/stan/math/opencl/kernels/device_functions/lgamma_stirling_diff.hpp +include/stan/math/opencl/kernels/device_functions/log1m.hpp +include/stan/math/opencl/kernels/device_functions/log1m_exp.hpp +include/stan/math/opencl/kernels/device_functions/log1m_inv_logit.hpp +include/stan/math/opencl/kernels/device_functions/log1p_exp.hpp +include/stan/math/opencl/kernels/device_functions/log_diff_exp.hpp +include/stan/math/opencl/kernels/device_functions/log_inv_logit.hpp +include/stan/math/opencl/kernels/device_functions/log_inv_logit_diff.hpp +include/stan/math/opencl/kernels/device_functions/logit.hpp +include/stan/math/opencl/kernels/device_functions/multiply_log.hpp +include/stan/math/opencl/kernels/device_functions/trigamma.hpp +include/stan/math/opencl/kernels/diag_inv.hpp +include/stan/math/opencl/kernels/divide_columns.hpp +include/stan/math/opencl/kernels/fill_strict_tri.hpp +include/stan/math/opencl/kernels/gp_exp_quad_cov.hpp +include/stan/math/opencl/kernels/gp_exponential_cov.hpp +include/stan/math/opencl/kernels/gp_matern32_cov.hpp +include/stan/math/opencl/kernels/gp_matern52_cov.hpp +include/stan/math/opencl/kernels/helpers.hpp +include/stan/math/opencl/kernels/inv_lower_tri_multiply.hpp +include/stan/math/opencl/kernels/matrix_multiply.hpp +include/stan/math/opencl/kernels/multiply_transpose.hpp +include/stan/math/opencl/kernels/neg_binomial_2_log_glm_lpmf.hpp +include/stan/math/opencl/kernels/neg_rect_lower_tri_multiply.hpp +include/stan/math/opencl/kernels/ordered_logistic_glm_lpmf.hpp +include/stan/math/opencl/kernels/ordered_logistic_lpmf.hpp +include/stan/math/opencl/kernels/pack.hpp +include/stan/math/opencl/kernels/rep_matrix.hpp +include/stan/math/opencl/kernels/unpack.hpp +include/stan/math/opencl/matrix_cl.hpp +include/stan/math/opencl/matrix_cl_view.hpp +include/stan/math/opencl/multiply_transpose.hpp +include/stan/math/opencl/opencl_context.hpp +include/stan/math/opencl/pinned_matrix.hpp +include/stan/math/opencl/plain_type.hpp +include/stan/math/opencl/prim.hpp +include/stan/math/opencl/prim/add_diag.hpp +include/stan/math/opencl/prim/append_array.hpp +include/stan/math/opencl/prim/bernoulli_cdf.hpp +include/stan/math/opencl/prim/bernoulli_lccdf.hpp +include/stan/math/opencl/prim/bernoulli_lcdf.hpp +include/stan/math/opencl/prim/bernoulli_logit_glm_lpmf.hpp +include/stan/math/opencl/prim/bernoulli_logit_lpmf.hpp +include/stan/math/opencl/prim/bernoulli_lpmf.hpp +include/stan/math/opencl/prim/beta_binomial_lpmf.hpp +include/stan/math/opencl/prim/beta_lpdf.hpp +include/stan/math/opencl/prim/beta_proportion_lpdf.hpp +include/stan/math/opencl/prim/binomial_logit_lpmf.hpp +include/stan/math/opencl/prim/binomial_lpmf.hpp +include/stan/math/opencl/prim/block.hpp +include/stan/math/opencl/prim/categorical_logit_glm_lpmf.hpp +include/stan/math/opencl/prim/cauchy_cdf.hpp +include/stan/math/opencl/prim/cauchy_lccdf.hpp +include/stan/math/opencl/prim/cauchy_lcdf.hpp +include/stan/math/opencl/prim/cauchy_lpdf.hpp +include/stan/math/opencl/prim/chi_square_lpdf.hpp +include/stan/math/opencl/prim/cholesky_decompose.hpp +include/stan/math/opencl/prim/col.hpp +include/stan/math/opencl/prim/cols.hpp +include/stan/math/opencl/prim/columns_dot_product.hpp +include/stan/math/opencl/prim/columns_dot_self.hpp +include/stan/math/opencl/prim/crossprod.hpp +include/stan/math/opencl/prim/diag_matrix.hpp +include/stan/math/opencl/prim/diag_post_multiply.hpp +include/stan/math/opencl/prim/diag_pre_multiply.hpp +include/stan/math/opencl/prim/dims.hpp +include/stan/math/opencl/prim/dirichlet_lpdf.hpp +include/stan/math/opencl/prim/distance.hpp +include/stan/math/opencl/prim/divide.hpp +include/stan/math/opencl/prim/divide_columns.hpp +include/stan/math/opencl/prim/dot_product.hpp +include/stan/math/opencl/prim/dot_self.hpp +include/stan/math/opencl/prim/double_exponential_cdf.hpp +include/stan/math/opencl/prim/double_exponential_lccdf.hpp +include/stan/math/opencl/prim/double_exponential_lcdf.hpp +include/stan/math/opencl/prim/double_exponential_lpdf.hpp +include/stan/math/opencl/prim/exp_mod_normal_cdf.hpp +include/stan/math/opencl/prim/exp_mod_normal_lccdf.hpp +include/stan/math/opencl/prim/exp_mod_normal_lcdf.hpp +include/stan/math/opencl/prim/exp_mod_normal_lpdf.hpp +include/stan/math/opencl/prim/exponential_cdf.hpp +include/stan/math/opencl/prim/exponential_lccdf.hpp +include/stan/math/opencl/prim/exponential_lcdf.hpp +include/stan/math/opencl/prim/exponential_lpdf.hpp +include/stan/math/opencl/prim/frechet_cdf.hpp +include/stan/math/opencl/prim/frechet_lccdf.hpp +include/stan/math/opencl/prim/frechet_lcdf.hpp +include/stan/math/opencl/prim/frechet_lpdf.hpp +include/stan/math/opencl/prim/gamma_lpdf.hpp +include/stan/math/opencl/prim/gp_dot_prod_cov.hpp +include/stan/math/opencl/prim/gp_exp_quad_cov.hpp +include/stan/math/opencl/prim/gp_exponential_cov.hpp +include/stan/math/opencl/prim/gp_matern32_cov.hpp +include/stan/math/opencl/prim/gp_matern52_cov.hpp +include/stan/math/opencl/prim/gumbel_cdf.hpp +include/stan/math/opencl/prim/gumbel_lccdf.hpp +include/stan/math/opencl/prim/gumbel_lcdf.hpp +include/stan/math/opencl/prim/gumbel_lpdf.hpp +include/stan/math/opencl/prim/head.hpp +include/stan/math/opencl/prim/identity_matrix.hpp +include/stan/math/opencl/prim/inv.hpp +include/stan/math/opencl/prim/inv_chi_square_lpdf.hpp +include/stan/math/opencl/prim/inv_cloglog.hpp +include/stan/math/opencl/prim/inv_gamma_lpdf.hpp +include/stan/math/opencl/prim/inv_sqrt.hpp +include/stan/math/opencl/prim/lb_constrain.hpp +include/stan/math/opencl/prim/log_mix.hpp +include/stan/math/opencl/prim/log_softmax.hpp +include/stan/math/opencl/prim/log_sum_exp.hpp +include/stan/math/opencl/prim/logistic_cdf.hpp +include/stan/math/opencl/prim/logistic_lccdf.hpp +include/stan/math/opencl/prim/logistic_lcdf.hpp +include/stan/math/opencl/prim/logistic_lpdf.hpp +include/stan/math/opencl/prim/lognormal_cdf.hpp +include/stan/math/opencl/prim/lognormal_lccdf.hpp 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+include/stan/math/prim/fun/constants.hpp +include/stan/math/prim/fun/copysign.hpp +include/stan/math/prim/fun/corr_constrain.hpp +include/stan/math/prim/fun/corr_free.hpp +include/stan/math/prim/fun/corr_matrix_constrain.hpp +include/stan/math/prim/fun/corr_matrix_free.hpp +include/stan/math/prim/fun/cos.hpp +include/stan/math/prim/fun/cosh.hpp +include/stan/math/prim/fun/cov_exp_quad.hpp +include/stan/math/prim/fun/cov_matrix_constrain.hpp +include/stan/math/prim/fun/cov_matrix_constrain_lkj.hpp +include/stan/math/prim/fun/cov_matrix_free.hpp +include/stan/math/prim/fun/cov_matrix_free_lkj.hpp +include/stan/math/prim/fun/crossprod.hpp +include/stan/math/prim/fun/csr_extract_u.hpp +include/stan/math/prim/fun/csr_extract_v.hpp +include/stan/math/prim/fun/csr_extract_w.hpp +include/stan/math/prim/fun/csr_matrix_times_vector.hpp +include/stan/math/prim/fun/csr_to_dense_matrix.hpp +include/stan/math/prim/fun/csr_u_to_z.hpp +include/stan/math/prim/fun/cumulative_sum.hpp +include/stan/math/prim/fun/determinant.hpp +include/stan/math/prim/fun/diag_matrix.hpp +include/stan/math/prim/fun/diag_post_multiply.hpp +include/stan/math/prim/fun/diag_pre_multiply.hpp +include/stan/math/prim/fun/diagonal.hpp +include/stan/math/prim/fun/digamma.hpp +include/stan/math/prim/fun/dims.hpp +include/stan/math/prim/fun/distance.hpp +include/stan/math/prim/fun/divide.hpp +include/stan/math/prim/fun/divide_columns.hpp +include/stan/math/prim/fun/dot.hpp +include/stan/math/prim/fun/dot_product.hpp +include/stan/math/prim/fun/dot_self.hpp +include/stan/math/prim/fun/eigen_comparisons.hpp +include/stan/math/prim/fun/eigenvalues.hpp +include/stan/math/prim/fun/eigenvalues_sym.hpp +include/stan/math/prim/fun/eigenvectors.hpp +include/stan/math/prim/fun/eigenvectors_sym.hpp +include/stan/math/prim/fun/elt_divide.hpp +include/stan/math/prim/fun/elt_multiply.hpp +include/stan/math/prim/fun/erf.hpp +include/stan/math/prim/fun/erfc.hpp +include/stan/math/prim/fun/eval.hpp +include/stan/math/prim/fun/exp.hpp +include/stan/math/prim/fun/exp2.hpp +include/stan/math/prim/fun/expm1.hpp +include/stan/math/prim/fun/fabs.hpp +include/stan/math/prim/fun/factor_U.hpp +include/stan/math/prim/fun/factor_cov_matrix.hpp +include/stan/math/prim/fun/falling_factorial.hpp +include/stan/math/prim/fun/fdim.hpp +include/stan/math/prim/fun/fill.hpp +include/stan/math/prim/fun/finite_diff_stepsize.hpp +include/stan/math/prim/fun/floor.hpp +include/stan/math/prim/fun/fma.hpp +include/stan/math/prim/fun/fmax.hpp +include/stan/math/prim/fun/fmin.hpp +include/stan/math/prim/fun/fmod.hpp +include/stan/math/prim/fun/gamma_p.hpp +include/stan/math/prim/fun/gamma_q.hpp +include/stan/math/prim/fun/generalized_inverse.hpp +include/stan/math/prim/fun/get.hpp +include/stan/math/prim/fun/get_base1.hpp +include/stan/math/prim/fun/get_base1_lhs.hpp +include/stan/math/prim/fun/get_lp.hpp +include/stan/math/prim/fun/gp_dot_prod_cov.hpp +include/stan/math/prim/fun/gp_exp_quad_cov.hpp +include/stan/math/prim/fun/gp_exponential_cov.hpp +include/stan/math/prim/fun/gp_matern32_cov.hpp +include/stan/math/prim/fun/gp_matern52_cov.hpp +include/stan/math/prim/fun/gp_periodic_cov.hpp +include/stan/math/prim/fun/grad_2F1.hpp +include/stan/math/prim/fun/grad_F32.hpp +include/stan/math/prim/fun/grad_inc_beta.hpp +include/stan/math/prim/fun/grad_reg_inc_beta.hpp +include/stan/math/prim/fun/grad_reg_inc_gamma.hpp +include/stan/math/prim/fun/grad_reg_lower_inc_gamma.hpp +include/stan/math/prim/fun/head.hpp +include/stan/math/prim/fun/hypot.hpp +include/stan/math/prim/fun/i_times.hpp +include/stan/math/prim/fun/identity_constrain.hpp +include/stan/math/prim/fun/identity_free.hpp +include/stan/math/prim/fun/identity_matrix.hpp +include/stan/math/prim/fun/if_else.hpp +include/stan/math/prim/fun/imag.hpp +include/stan/math/prim/fun/inc_beta.hpp +include/stan/math/prim/fun/inc_beta_dda.hpp +include/stan/math/prim/fun/inc_beta_ddb.hpp +include/stan/math/prim/fun/inc_beta_ddz.hpp +include/stan/math/prim/fun/initialize.hpp +include/stan/math/prim/fun/initialize_fill.hpp +include/stan/math/prim/fun/int_step.hpp +include/stan/math/prim/fun/inv.hpp +include/stan/math/prim/fun/inv_Phi.hpp +include/stan/math/prim/fun/inv_cloglog.hpp +include/stan/math/prim/fun/inv_logit.hpp +include/stan/math/prim/fun/inv_sqrt.hpp +include/stan/math/prim/fun/inv_square.hpp +include/stan/math/prim/fun/inverse.hpp +include/stan/math/prim/fun/inverse_softmax.hpp +include/stan/math/prim/fun/inverse_spd.hpp +include/stan/math/prim/fun/is_any_nan.hpp +include/stan/math/prim/fun/is_inf.hpp +include/stan/math/prim/fun/is_integer.hpp +include/stan/math/prim/fun/is_nan.hpp +include/stan/math/prim/fun/is_nonpositive_integer.hpp +include/stan/math/prim/fun/is_uninitialized.hpp +include/stan/math/prim/fun/isfinite.hpp +include/stan/math/prim/fun/isinf.hpp +include/stan/math/prim/fun/isnan.hpp +include/stan/math/prim/fun/isnormal.hpp +include/stan/math/prim/fun/lambert_w.hpp +include/stan/math/prim/fun/lb_constrain.hpp +include/stan/math/prim/fun/lb_free.hpp +include/stan/math/prim/fun/lbeta.hpp +include/stan/math/prim/fun/ldexp.hpp +include/stan/math/prim/fun/lgamma.hpp +include/stan/math/prim/fun/lgamma_stirling.hpp +include/stan/math/prim/fun/lgamma_stirling_diff.hpp +include/stan/math/prim/fun/linspaced_array.hpp +include/stan/math/prim/fun/linspaced_int_array.hpp +include/stan/math/prim/fun/linspaced_row_vector.hpp +include/stan/math/prim/fun/linspaced_vector.hpp +include/stan/math/prim/fun/lmgamma.hpp +include/stan/math/prim/fun/log.hpp +include/stan/math/prim/fun/log10.hpp +include/stan/math/prim/fun/log1m.hpp +include/stan/math/prim/fun/log1m_exp.hpp +include/stan/math/prim/fun/log1m_inv_logit.hpp +include/stan/math/prim/fun/log1p.hpp +include/stan/math/prim/fun/log1p_exp.hpp +include/stan/math/prim/fun/log2.hpp +include/stan/math/prim/fun/log_determinant.hpp +include/stan/math/prim/fun/log_determinant_ldlt.hpp +include/stan/math/prim/fun/log_determinant_spd.hpp +include/stan/math/prim/fun/log_diff_exp.hpp +include/stan/math/prim/fun/log_falling_factorial.hpp +include/stan/math/prim/fun/log_inv_logit.hpp +include/stan/math/prim/fun/log_inv_logit_diff.hpp +include/stan/math/prim/fun/log_mix.hpp +include/stan/math/prim/fun/log_modified_bessel_first_kind.hpp +include/stan/math/prim/fun/log_rising_factorial.hpp +include/stan/math/prim/fun/log_softmax.hpp +include/stan/math/prim/fun/log_sum_exp.hpp +include/stan/math/prim/fun/logb.hpp +include/stan/math/prim/fun/logical_and.hpp +include/stan/math/prim/fun/logical_eq.hpp +include/stan/math/prim/fun/logical_gt.hpp +include/stan/math/prim/fun/logical_gte.hpp +include/stan/math/prim/fun/logical_lt.hpp +include/stan/math/prim/fun/logical_lte.hpp +include/stan/math/prim/fun/logical_negation.hpp +include/stan/math/prim/fun/logical_neq.hpp +include/stan/math/prim/fun/logical_or.hpp +include/stan/math/prim/fun/logit.hpp *** 920 LINES SKIPPED ***
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