Date: Wed, 8 Feb 2006 15:26:46 -0300 From: Fernan Aguero <fernan@iib.unsam.edu.ar> To: FreeBSD-bio <freebsd-bio@freebsd.net> Cc: FreeBSD Ports <ports@FreeBSD.ORG> Subject: HEADS UP: upcoming change of default PREFIX for emboss/embassy Message-ID: <20060208182646.GB86953@iib.unsam.edu.ar>
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To all interested parties, I've been delaying the upgrade of the emboss and embassy ports, because they are currently conflicting with other ports if installed into the default ($LOCALBASE) prefix. I've now got patches ready for submission that change the default PREFIX for both ports. From EMBOSS-3.0.0, they will install by default in $LOCALBASE/emboss As usual, EMBASSY should be installed into the same prefix as EMBOSS. The default PREFIX is thus the same for both ports. However users installing these ports into other places, should set PREFIX to the same path for both EMBOSS and EMBASSY. Finally, installing into $LOCALBASE (/usr/local) is also possible if you set PREFIX to this value manually. But, you will have to take care of conflicting ports yourself. Patches are in http://genoma.unsam.edu.ar/~fernan/freebsd/emboss/ The updated emboss-3.0.0 port will include all bugfixes posted after the release: ftp://emboss.open-bio.org/pub/EMBOSS/fixes/README I'll submit a PR with the updates soon. Fernan
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