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Date:      Tue, 10 Jan 2017 13:23:21 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 110armv6-quarterly][biology/tinker] Failed for tinker-7.1.3_1 in build
Message-ID:  <201701101323.v0ADNL7t087582@beefy15.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     ports@FreeBSD.org
Last committer: gerald@FreeBSD.org
Ident:          $FreeBSD: branches/2017Q1/biology/tinker/Makefile 428057 2016-12-07 13:24:56Z gerald $
Log URL:        http://beefy15.nyi.freebsd.org/data/110armv6-quarterly/431036/logs/tinker-7.1.3_1.log
Build URL:      http://beefy15.nyi.freebsd.org/build.html?mastername=110armv6-quarterly&build=431036
Log:

====>> Building biology/tinker
build started at Tue Jan 10 11:40:27 UTC 2017
port directory: /usr/ports/biology/tinker
building for: FreeBSD 110armv6-quarterly-job-24 11.0-RELEASE-p5 FreeBSD 11.0-RELEASE-p5 r309692 arm
maintained by: ports@FreeBSD.org
Makefile ident:      $FreeBSD: branches/2017Q1/biology/tinker/Makefile 428057 2016-12-07 13:24:56Z gerald $
Poudriere version: 3.1.14
Host OSVERSION: 1200017
Jail OSVERSION: 1100122
Job Id: 24

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-RELEASE-p5 r309692
UNAME_r=11.0-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/110armv6-quarterly/ref
QEMU_EMULATING=1
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=tinker-7.1.3_1
OSREL=11.0
_OSRELEASE=11.0-RELEASE-p5
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=28
PWD=/usr/local/poudriere/data/.m/110armv6-quarterly/ref/.p/pool
MASTERNAME=110armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.14
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100122
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for tinker-7.1.3_1:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
     OPTIMIZED_FFLAGS=off: compilation optimizations
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran49" FC="gfortran49" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc49" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc49" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/tinker/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/tinker/work  HOME=/wrkdirs/usr/ports/biology/tinker/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
HAVE_G2C=yes F77="gfortran49" FC="gfortran49" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc49" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc49" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/tinker/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/tinker/work  HOME=/wrkdirs/usr/ports/biology/tinker/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc49  -L/usr/local/lib/gcc49 -B/usr/l
 ocal/bin" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/tinker"
EXAMPLESDIR="share/examples/tinker"
DATADIR="share/tinker"
WWWDIR="www/tinker"
ETCDIR="etc/tinker"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/tinker
DOCSDIR=/usr/local/share/doc/tinker
EXAMPLESDIR=/usr/local/share/examples/tinker
WWWDIR=/usr/local/www/tinker
ETCDIR=/usr/local/etc/tinker
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
MACHINE=arm
MACHINE_ARCH=armv6
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
---Begin make.nxb.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
---End make.nxb.conf---
=======================<phase: check-sanity   >============================
===>   NOTICE:

The tinker port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>  License tinker accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   tinker-7.1.3_1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.9.4_1.txz
pkg-static: Warning: Major OS version upgrade detected.  Running "pkg-static install -f pkg" recommended
[110armv6-quarterly-job-24] Installing pkg-1.9.4_1...
[110armv6-quarterly-job-24] Extracting pkg-1.9.4_1: .......... done
===>   tinker-7.1.3_1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of tinker-7.1.3_1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>   NOTICE:

The tinker port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>  License tinker accepted by the user
=> tinker-7.1.3.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch http://dasher.wustl.edu/tinker/downloads/tinker-7.1.3.tar.gz
tinker-7.1.3.tar.gz                                      0  B    0  Bps
===> Fetching all distfiles required by tinker-7.1.3_1 for building
===========================================================================
=======================<phase: checksum       >============================
===>   NOTICE:

The tinker port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>  License tinker accepted by the user
===> Fetching all distfiles required by tinker-7.1.3_1 for building
=> SHA256 Checksum OK for tinker-7.1.3.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
<snip>
a - kpitor.o
a - kpitors.o
a - kpolar.o
a - kpolr.o
a - ksolv.o
a - kstbnd.o
a - kstrbnd.o
a - kstrtor.o
a - ksttor.o
a - ktors.o
a - ktorsn.o
a - ktortor.o
a - ktrtor.o
a - kurey.o
a - kurybr.o
a - kvdw.o
a - kvdwpr.o
a - kvdws.o
a - lattice.o
a - lbfgs.o
a - light.o
a - lights.o
a - limits.o
a - linmin.o
a - makeint.o
a - makeref.o
a - makexyz.o
a - math.o
a - maxwell.o
a - mdinit.o
a - mdrest.o
a - mdsave.o
a - mdstat.o
a - mdstuf.o
a - mechanic.o
a - merck.o
a - merge.o
a - minima.o
a - molcul.o
a - moldyn.o
a - molecule.o
a - moment.o
a - moments.o
a - mplpot.o
a - mpole.o
a - mutant.o
a - mutate.o
a - nblist.o
a - neigh.o
a - nextarg.o
a - nexttext.o
a - nonpol.o
a - nose.o
a - nspline.o
a - nucleo.o
a - number.o
a - numeral.o
a - numgrad.o
a - ocvm.o
a - omega.o
a - opbend.o
a - opdist.o
a - openend.o
a - openmp.o
a - optsave.o
a - orbital.o
a - orbits.o
a - orient.o
a - orthog.o
a - output.o
a - overlap.o
a - params.o
a - paths.o
a - pbstuf.o
a - pdb.o
a - phipsi.o
a - picalc.o
a - piorbs.o
a - pistuf.o
a - pitors.o
a - pme.o
a - pmestuff.o
a - pmpb.o
a - polar.o
a - polgrp.o
a - polpot.o
a - polymer.o
a - potent.o
a - potfit.o
a - precis.o
a - precise.o
a - pressure.o
a - prmkey.o
a - promo.o
a - prtdyn.o
a - prterr.o
a - prtint.o
a - prtmol2.o
a - prtpdb.o
a - prtprm.o
a - prtseq.o
a - prtxyz.o
a - ptable.o
a - qmstuf.o
a - qrfact.o
a - quatfit.o
a - random.o
a - rattle.o
a - readdyn.o
a - readgau.o
a - readint.o
a - readmol.o
a - readmol2.o
a - readpdb.o
a - readprm.o
a - readseq.o
a - readxyz.o
a - refer.o
a - replica.o
a - resdue.o
a - respa.o
a - restrn.o
a - rgddyn.o
a - rgdstep.o
a - rigid.o
a - ring.o
a - rings.o
a - rmsfit.o
a - rotbnd.o
a - rotlist.o
a - rotpole.o
a - rxnfld.o
a - rxnpot.o
a - scales.o
a - sdstep.o
a - search.o
a - sequen.o
a - server.o
a - shakeup.o
a - shunt.o
a - sigmoid.o
a - sizes.o
a - sktstuff.o
a - socket.o
a - solute.o
a - sort.o
a - square.o
a - stodyn.o
a - strbnd.o
a - strtor.o
a - suffix.o
a - surface.o
a - surfatom.o
a - switch.o
a - syntrn.o
a - tarray.o
a - temper.o
a - titles.o
a - tncg.o
a - torphase.o
a - torpot.o
a - torque.o
a - tors.o
a - torsions.o
a - tortor.o
a - tree.o
a - trimtext.o
a - unitcell.o
a - units.o
a - uprior.o
a - urey.o
a - urypot.o
a - usage.o
a - usolve.o
a - valfit.o
a - vdw.o
a - vdwpot.o
a - verlet.o
a - version.o
a - vibs.o
a - virial.o
a - volume.o
a - warp.o
a - xtals.o
a - xyzatm.o
a - zatom.o
a - zclose.o
a - zcoord.o
ranlib libtinker.a
gfortran49  -Wl,-rpath=/usr/local/lib/gcc49  -L/usr/local/lib/gcc49 -B/usr/local/bin -o alchemy.x alchemy.o libtinker.a 
/usr/local/lib/gcc49/libgfortran.so: undefined reference to `fpgetsticky'
collect2: error: ld returned 1 exit status
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/biology/tinker/work/tinker/source
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/tinker



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