Date: Mon, 26 Aug 2013 16:06:38 +0000 (UTC) From: Brendan Fabeny <bf@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r325401 - in head: audio/snd benchmarks/flowgrind benchmarks/sipp biology/adun comms/gnuradio editors/calligra graphics/amide graphics/enblend graphics/inkscape graphics/luminance graph... Message-ID: <201308261606.r7QG6cfv062694@svn.freebsd.org>
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Author: bf Date: Mon Aug 26 16:06:37 2013 New Revision: 325401 URL: http://svnweb.freebsd.org/changeset/ports/325401 Log: Update math/gsl to 1.16 and adjust some dependent ports Modified: head/audio/snd/Makefile (contents, props changed) head/benchmarks/flowgrind/Makefile head/benchmarks/sipp/Makefile head/biology/adun/Makefile (contents, props changed) head/comms/gnuradio/Makefile head/editors/calligra/Makefile head/graphics/amide/Makefile head/graphics/enblend/Makefile head/graphics/inkscape/Makefile head/graphics/luminance/Makefile head/graphics/nip2/Makefile head/graphics/ocropus/Makefile head/graphics/qgis/Makefile head/lang/algol68g/Makefile (contents, props changed) head/mail/bogofilter/Makefile head/math/asymptote/Makefile (contents, props changed) head/math/dieharder/Makefile (contents, props changed) head/math/fflas-ffpack/Makefile head/math/giacxcas/Makefile head/math/gsl/Makefile (contents, props changed) head/math/gsl/distinfo (contents, props changed) head/math/gsl/pkg-plist (contents, props changed) head/math/labplot/Makefile head/math/ocamlgsl/Makefile (contents, props changed) head/math/octave-forge-gsl/Makefile (contents, props changed) head/math/orpie/Makefile (contents, props changed) head/math/p5-Math-GSL/Makefile head/math/p5-Math-GSL/pkg-descr (contents, props changed) head/math/pspp/Makefile head/math/py-gsl/Makefile (contents, props changed) head/math/qtiplot/Makefile head/math/ruby-gsl/Makefile (contents, props changed) head/science/abinit/Makefile (contents, props changed) head/science/afni/Makefile head/science/getdp/Makefile (contents, props changed) head/science/gnudatalanguage/Makefile head/science/gromacs/Makefile head/science/kst2/Makefile head/science/py-mlpy/Makefile (contents, props changed) head/science/step/Makefile Modified: head/audio/snd/Makefile ============================================================================== --- head/audio/snd/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/audio/snd/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= snd PORTVERSION= 13.0 +PORTREVISION= 1 CATEGORIES= audio MASTER_SITES= ftp://ccrma-ftp.stanford.edu/pub/Lisp/ \ http://mirror.mcx2.org/ @@ -42,7 +43,7 @@ CONFIGURE_ARGS+= --without-fftw .endif .if ${PORT_OPTIONS:MGSL} -LIB_DEPENDS+= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS+= gsl:${PORTSDIR}/math/gsl .else CONFIGURE_ARGS+= --without-gsl .endif Modified: head/benchmarks/flowgrind/Makefile ============================================================================== --- head/benchmarks/flowgrind/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/benchmarks/flowgrind/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= flowgrind PORTVERSION= 0.6.1 +PORTREVISION= 1 CATEGORIES= benchmarks MASTER_SITES= https://launchpad.net/flowgrind/trunk/${PORTNAME}-0.6.1/+download/ Modified: head/benchmarks/sipp/Makefile ============================================================================== --- head/benchmarks/sipp/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/benchmarks/sipp/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -31,7 +31,7 @@ PCAPPLAY_DESC= RTP play support .include <bsd.port.options.mk> .if ${PORT_OPTIONS:MGSL} -LIB_DEPENDS+= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS+= gsl:${PORTSDIR}/math/gsl MAKE_ENV+= EXTRACPPFLAGS=-DHAVE_GSL \ EXTRACFLAGS=-DHAVE_GSL \ Modified: head/biology/adun/Makefile ============================================================================== --- head/biology/adun/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/biology/adun/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,7 +7,7 @@ PORTNAME= adun PORTVERSION= 0.81 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= biology gnustep MASTER_SITES= http://download.gna.org/adun/ DISTNAME= Adun-${PORTVERSION} @@ -15,7 +15,7 @@ DISTNAME= Adun-${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Molecular Simulator for GNUstep -LIB_DEPENDS+= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS+= gsl:${PORTSDIR}/math/gsl LICENSE= GPLv2 Modified: head/comms/gnuradio/Makefile ============================================================================== --- head/comms/gnuradio/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/comms/gnuradio/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -2,6 +2,7 @@ PORTNAME= gnuradio PORTVERSION= 3.6.5 +PORTREVISION= 1 CATEGORIES= comms astro hamradio MASTER_SITES= http://gnuradio.org/releases/gnuradio/ \ ${MASTER_SITE_LOCAL} Modified: head/editors/calligra/Makefile ============================================================================== --- head/editors/calligra/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/editors/calligra/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -2,7 +2,7 @@ PORTNAME= calligra PORTVERSION= ${CALLIGRA_VERSION} -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= editors kde MASTER_SITES= ${MASTER_SITE_KDE} MASTER_SITE_SUBDIR= ${CALLIGRA_BRANCH}/${PORTNAME}-${PORTVERSION}/ Modified: head/graphics/amide/Makefile ============================================================================== --- head/graphics/amide/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/amide/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -2,6 +2,7 @@ PORTNAME= amide PORTVERSION= 1.0.4 +PORTREVISION= 1 CATEGORIES= graphics MASTER_SITES= SF EXTRACT_SUFX= .tgz Modified: head/graphics/enblend/Makefile ============================================================================== --- head/graphics/enblend/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/enblend/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= enblend PORTVERSION= 4.1.1 +PORTREVISION= 1 CATEGORIES= graphics MASTER_SITES= SF/enblend/enblend-enfuse/enblend-enfuse-${PORTVERSION:R} DISTNAME= enblend-enfuse-${PORTVERSION} Modified: head/graphics/inkscape/Makefile ============================================================================== --- head/graphics/inkscape/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/inkscape/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= inkscape PORTVERSION= 0.48.4 +PORTREVISION= 1 CATEGORIES= graphics gnome MASTER_SITES= SF MASTER_SITE_SUBDIR=${PORTNAME:L}/${PORTNAME:L}/${PORTVERSION} Modified: head/graphics/luminance/Makefile ============================================================================== --- head/graphics/luminance/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/luminance/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -6,7 +6,7 @@ # PORTNAME= luminance-hdr -PORTREVISION= 1 +PORTREVISION= 2 DISTVERSION= 2.3.0 CATEGORIES= graphics MASTER_SITES= SF/qtpfsgui/luminance/${DISTVERSION} Modified: head/graphics/nip2/Makefile ============================================================================== --- head/graphics/nip2/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/nip2/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= nip2 PORTVERSION= 7.26.3 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= graphics MASTER_SITES= http://www.vips.ecs.soton.ac.uk/supported/${PORTVERSION:R}/ Modified: head/graphics/ocropus/Makefile ============================================================================== --- head/graphics/ocropus/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/ocropus/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= ocropus PORTVERSION= 0.4 -PORTREVISION= 10 +PORTREVISION= 11 CATEGORIES= graphics MASTER_SITES= ${MASTER_SITE_GOOGLE_CODE} @@ -14,7 +14,7 @@ LIB_DEPENDS= png15:${PORTSDIR}/graphics/ jpeg.11:${PORTSDIR}/graphics/jpeg \ tiff.4:${PORTSDIR}/graphics/tiff \ iulib.0:${PORTSDIR}/graphics/iulib \ - gsl.16:${PORTSDIR}/math/gsl + gsl:${PORTSDIR}/math/gsl WRKSRC= ${WRKDIR}/ocropus-0.4/ocropus Modified: head/graphics/qgis/Makefile ============================================================================== --- head/graphics/qgis/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/graphics/qgis/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= qgis PORTVERSION= 1.8.0 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= graphics geography MASTER_SITES= http://qgis.org/downloads/ \ http://download.osgeo.org/qgis/src/ Modified: head/lang/algol68g/Makefile ============================================================================== --- head/lang/algol68g/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/lang/algol68g/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -2,6 +2,7 @@ PORTNAME= algol68g PORTVERSION= 2.7 +PORTREVISION= 1 CATEGORIES= lang MASTER_SITES= http://jmvdveer.home.xs4all.nl/ Modified: head/mail/bogofilter/Makefile ============================================================================== --- head/mail/bogofilter/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/mail/bogofilter/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= bogofilter PORTVERSION= 1.2.4 -PORTREVISION?= 0 +PORTREVISION?= 1 CATEGORIES?= mail MASTER_SITES= SF/bogofilter/bogofilter-current/bogofilter-${PORTVERSION} Modified: head/math/asymptote/Makefile ============================================================================== --- head/math/asymptote/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/asymptote/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= asymptote PORTVERSION= 2.16 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= math MASTER_SITES= SF MASTER_SITE_SUBDIR= ${PORTNAME}/${PORTVERSION} Modified: head/math/dieharder/Makefile ============================================================================== --- head/math/dieharder/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/dieharder/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,6 +7,7 @@ PORTNAME= dieharder PORTVERSION= 3.31.1 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= http://www.phy.duke.edu/~rgb/General/dieharder/ LOCAL/bf EXTRACT_SUFX= .tgz Modified: head/math/fflas-ffpack/Makefile ============================================================================== --- head/math/fflas-ffpack/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/fflas-ffpack/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= fflas-ffpack PORTVERSION= 1.4.3 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= http://linalg.org/ LOCAL/bf Modified: head/math/giacxcas/Makefile ============================================================================== --- head/math/giacxcas/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/giacxcas/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= giacxcas PORTVERSION= 1.0.0 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= http://www-fourier.ujf-grenoble.fr/~parisse/giac/freebsd/ \ http://people.math.jussieu.fr/~han/xcas/sources/ Modified: head/math/gsl/Makefile ============================================================================== --- head/math/gsl/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/gsl/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -1,13 +1,8 @@ -# New ports collection makefile for: gsl -# Date created: 15 Feb 2000 -# Whom: Andrew L. Neporada <andrew@chg.ru> -# +# Created by: Andrew L. Neporada <andrew@chg.ru> # $FreeBSD$ -# PORTNAME= gsl -PORTVERSION= 1.15 -PORTREVISION= 1 +PORTVERSION= 1.16 CATEGORIES= math MASTER_SITES= GNU @@ -27,9 +22,15 @@ INFO= gsl-ref post-extract: @${RM} -f ${WRKSRC}/doc/gsl-ref.info* +#prevent regression test coredumps from causing failures on the +#package-building cluster: +.ifndef(MAINTAINER_MODE) +CORELIMIT?= /usr/bin/limits -Sc 0 +.endif + check regression-test test: build - @(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} ${MAKE} ${_MAKE_JOBS} \ - ${MAKE_ARGS} check) + @cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} ${CORELIMIT} ${MAKE_CMD} \ + ${MAKE_ARGS} check .include <bsd.port.pre.mk> Modified: head/math/gsl/distinfo ============================================================================== --- head/math/gsl/distinfo Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/gsl/distinfo Mon Aug 26 16:06:37 2013 (r325401) @@ -1,2 +1,2 @@ -SHA256 (gsl-1.15.tar.gz) = 85b907e57902e2b7606ef3aef960302ffdd13bd9dc5b8fcbfa75e4f0bf340ea3 -SIZE (gsl-1.15.tar.gz) = 3281134 +SHA256 (gsl-1.16.tar.gz) = 73bc2f51b90d2a780e6d266d43e487b3dbd78945dd0b04b14ca5980fe28d2f53 +SIZE (gsl-1.16.tar.gz) = 3534080 Modified: head/math/gsl/pkg-plist ============================================================================== --- head/math/gsl/pkg-plist Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/gsl/pkg-plist Mon Aug 26 16:06:37 2013 (r325401) @@ -223,7 +223,7 @@ include/gsl/gsl_wavelet2d.h lib/libgsl.a lib/libgsl.la lib/libgsl.so -lib/libgsl.so.16 +lib/libgsl.so.17 lib/libgslcblas.a lib/libgslcblas.la lib/libgslcblas.so Modified: head/math/labplot/Makefile ============================================================================== --- head/math/labplot/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/labplot/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= labplot DISTVERSION= 2.0.0.alpha3 +PORTREVISION= 1 CATEGORIES= math kde MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTVERSION:R} Modified: head/math/ocamlgsl/Makefile ============================================================================== --- head/math/ocamlgsl/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/ocamlgsl/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,6 +7,7 @@ PORTNAME= ocamlgsl PORTVERSION= 0.6.0 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= http://oandrieu.nerim.net/ocaml/gsl/ @@ -27,6 +28,7 @@ USE_GMAKE= YES USE_GCC= 4.2+ USE_OCAML= YES MAKE_ENV+= OCAMLDIR=${OCAML_LIBDIR} +MAKE_JOBS_UNSAFE= yes NO_OCAML_BUILDDEPENDS= yes USE_OCAML_LDCONFIG= yes Modified: head/math/octave-forge-gsl/Makefile ============================================================================== --- head/math/octave-forge-gsl/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/octave-forge-gsl/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= octave-forge-gsl PORTVERSION= 1.0.8 -PORTREVISION= 10 +PORTREVISION= 11 CATEGORIES= math MAINTAINER= stephen@FreeBSD.org Modified: head/math/orpie/Makefile ============================================================================== --- head/math/orpie/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/orpie/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,7 +7,7 @@ PORTNAME= orpie PORTVERSION= 1.5.1 -PORTREVISION= 5 +PORTREVISION= 6 CATEGORIES+= math MASTER_SITES= http://pessimization.com/software/orpie/ @@ -15,7 +15,7 @@ MAINTAINER= dylan@dylex.net COMMENT= A fullscreen RPN calculator for the console BUILD_DEPENDS= ocamlc:${PORTSDIR}/lang/ocaml -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl GNU_CONFIGURE= yes USE_GMAKE= yes Modified: head/math/p5-Math-GSL/Makefile ============================================================================== --- head/math/p5-Math-GSL/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/p5-Math-GSL/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= Math-GSL PORTVERSION= 0.27 +PORTREVISION= 1 CATEGORIES= math perl5 MASTER_SITES= CPAN PKGNAMEPREFIX= p5- @@ -82,4 +83,10 @@ MAN3= Math::GSL.3 \ BROKEN= Does not compile on sparc64 .endif +post-patch: + @${REINPLACE_CMD} -Ee 's/(\()(back|for)(ward\))/\1gsl_fft_\2\3/' \ + ${WRKSRC}/xs/FFT_wrap.1.15.c + @${REINPLACE_CMD} -Ee 's/(\()(back|for)(ward\))/\1gsl_wavelet_\2\3/' \ + ${WRKSRC}/xs/Wavelet_wrap.1.15.c + .include <bsd.port.post.mk> Modified: head/math/p5-Math-GSL/pkg-descr ============================================================================== --- head/math/p5-Math-GSL/pkg-descr Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/p5-Math-GSL/pkg-descr Mon Aug 26 16:06:37 2013 (r325401) @@ -4,5 +4,4 @@ The GSL is itself distributed under GPL Only the routines relating the solving of polynomials are exported. It exists to provide that function to "tkscope" in Audio::Data. -WWW: http://sources.redhat.com/gsl/ - http://search.cpan.org/dist/Math-GSL/ +WWW: http://search.cpan.org/dist/Math-GSL/ Modified: head/math/pspp/Makefile ============================================================================== --- head/math/pspp/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/pspp/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= pspp PORTVERSION= 0.6.2 -PORTREVISION= 9 +PORTREVISION= 10 CATEGORIES= math MASTER_SITES= GNU @@ -11,7 +11,7 @@ MAINTAINER= sylvio@FreeBSD.org COMMENT= Program for statistical analysis of sampled data LIB_DEPENDS= plot.4:${PORTSDIR}/graphics/plotutils \ - gslcblas.0:${PORTSDIR}/math/gsl + gslcblas:${PORTSDIR}/math/gsl OPTIONS_DEFINE= GUI PGSQL Modified: head/math/py-gsl/Makefile ============================================================================== --- head/math/py-gsl/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/py-gsl/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,7 +7,7 @@ PORTNAME= gsl PORTVERSION= 0.9.5 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= math python MASTER_SITES= SF/py${PORTNAME}/py${PORTNAME}/py${PORTNAME}-${PORTVERSION} PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -19,7 +19,7 @@ COMMENT= Python interface to GNU Scienti BUILD_DEPENDS= ${PYTHON_SITELIBDIR}/numpy/core/include/numpy/arrayobject.h:${PORTSDIR}/math/py-numpy RUN_DEPENDS= ${PYTHON_SITELIBDIR}/numpy/__init__.py:${PORTSDIR}/math/py-numpy -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl PLIST_SUB= PYTHON_SITELIBDIR=${PYTHON_SITELIBDIR:S,^${LOCALBASE}/,,g} USE_PYTHON= yes Modified: head/math/qtiplot/Makefile ============================================================================== --- head/math/qtiplot/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/qtiplot/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= qtiplot DISTVERSION= 0.9.8.9 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= math science MASTER_SITES= BERLIOS http://soft.proindependent.com/src/ @@ -11,7 +11,7 @@ MAINTAINER= makc@FreeBSD.org COMMENT= Data analysis and scientific plotting BUILD_DEPENDS= ${LOCALBASE}/lib/libmuparser.a:${PORTSDIR}/math/muparser -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl \ +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl \ png15:${PORTSDIR}/graphics/png # use bundled modified libraries # qwt.5:${PORTSDIR}/x11-toolkits/qwt5 \ Modified: head/math/ruby-gsl/Makefile ============================================================================== --- head/math/ruby-gsl/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/math/ruby-gsl/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,6 +7,7 @@ PORTNAME= gsl PORTVERSION= 1.14.7 +PORTREVISION= 1 CATEGORIES= math ruby MASTER_SITES= RF MASTER_SITE_SUBDIR= rb-${PORTNAME} @@ -18,7 +19,7 @@ DIST_SUBDIR= ruby MAINTAINER= clsung@FreeBSD.org COMMENT= A Ruby extension library for GSL (GNU Scientific Library) -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl USE_RUBY= yes USE_RUBY_SETUP= yes @@ -35,6 +36,11 @@ post-patch: ${WRKSRC}/ext/matrix_complex.c ${REINPLACE_CMD} -e 's|gsl_vector_complex_equal|rb_&|g' \ ${WRKSRC}/ext/vector_complex.c + ${REINPLACE_CMD} -Ee \ + '/(gsl_wavelet_direction|INT2FIX)/s/(for|back)ward/gsl_wavelet_&/' \ + ${WRKSRC}/ext/wavelet.c + ${REINPLACE_CMD} -Ee '/INT2FIX/s/(for|back)ward/gsl_fft_&/' \ + ${WRKSRC}/ext/fft.c post-install: .if !defined(NOPORTEXAMPLES) Modified: head/science/abinit/Makefile ============================================================================== --- head/science/abinit/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/abinit/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,7 +7,7 @@ PORTNAME= abinit PORTVERSION= 5.7.3 -PORTREVISION= 10 +PORTREVISION= 11 CATEGORIES= science MASTER_SITES= ftp://ftp.abinit.org/pub/abinitio/ABINIT_v${PORTVERSION}/ @@ -16,7 +16,7 @@ COMMENT= Abinit calculates electronic st BUILD_DEPENDS= ${PYTHON_SITELIBDIR}/numarray/__init__.py:${PORTSDIR}/math/py-numarray LIB_DEPENDS= netcdff.4:${PORTSDIR}/science/netcdf3-ftn \ - gsl.16:${PORTSDIR}/math/gsl + gsl:${PORTSDIR}/math/gsl USE_FORTRAN= yes USE_GMAKE= yes Modified: head/science/afni/Makefile ============================================================================== --- head/science/afni/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/afni/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -11,7 +11,7 @@ PORTNAME= afni PORTVERSION= 2012.04.17.2129 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= science biology graphics MASTER_SITES= http://personalpages.tds.net/~jwbacon/Ports/distfiles/AFNI/${PORTVERSION}/ \ http://www.acadix.biz/Ports/distfiles/AFNI/${PORTVERSION}/ Modified: head/science/getdp/Makefile ============================================================================== --- head/science/getdp/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/getdp/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= getdp PORTVERSION= 2.2.1 +PORTREVISION= 1 CATEGORIES= science MASTER_SITES= http://www.geuz.org/getdp/src/ DISTNAME= ${PORTNAME}-${PORTVERSION}-source @@ -11,7 +12,7 @@ EXTRACT_SUFX= .tgz MAINTAINER= stephen@FreeBSD.org COMMENT= A rather general finite element solver using mixed finite elements -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl \ +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl \ lapack.4:${PORTSDIR}/math/lapack USE_GMAKE= yes Modified: head/science/gnudatalanguage/Makefile ============================================================================== --- head/science/gnudatalanguage/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/gnudatalanguage/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,7 +3,7 @@ PORTNAME= gnudatalanguage DISTVERSION= 0.9.3 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science lang MASTER_SITES= SF/${PORTNAME}/gdl/${DISTVERSION} .if defined(BUILD_PYTHON_MODULE) @@ -30,7 +30,7 @@ LICENSE= GPLv2 LIB_DEPENDS+= plplotd.11:${PORTSDIR}/math/plplot \ ps.4:${PORTSDIR}/print/pslib \ - gsl.16:${PORTSDIR}/math/gsl \ + gsl:${PORTSDIR}/math/gsl \ dps.0:${PORTSDIR}/x11/dgs USE_GCC= yes Modified: head/science/gromacs/Makefile ============================================================================== --- head/science/gromacs/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/gromacs/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,6 +3,7 @@ PORTNAME= gromacs PORTVERSION= 4.6.3 +PORTREVISION= 1 CATEGORIES= science MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ Modified: head/science/kst2/Makefile ============================================================================== --- head/science/kst2/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/kst2/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -3,13 +3,14 @@ PORTNAME= kst DISTVERSION= 2.0.6 +PORTREVISION= 1 CATEGORIES= science kde MASTER_SITES= SF/${PORTNAME}/Kst%20${DISTVERSION:C/-r.*//}/ MAINTAINER= makc@FreeBSD.org COMMENT= Data viewing and plotting tool -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl LATEST_LINK= kst2 Modified: head/science/py-mlpy/Makefile ============================================================================== --- head/science/py-mlpy/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/py-mlpy/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -7,7 +7,7 @@ PORTNAME= mlpy PORTVERSION= 2.2.2 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science python MASTER_SITES= https://mlpy.fbk.eu/download/src/ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -19,7 +19,7 @@ COMMENT= High performance Python package BUILD_DEPENDS= ${PYTHON_SITELIBDIR}/numpy:${PORTSDIR}/math/py-numpy \ cython>0:${PORTSDIR}/lang/cython RUN_DEPENDS:= ${BUILD_DEPENDS} -LIB_DEPENDS= gsl.16:${PORTSDIR}/math/gsl +LIB_DEPENDS= gsl:${PORTSDIR}/math/gsl CFLAGS+= -I${LOCALBASE}/include -I${PYTHON_SITELIBDIR}/numpy/core LDFLAGS+= -L${LOCALBASE}/lib Modified: head/science/step/Makefile ============================================================================== --- head/science/step/Makefile Mon Aug 26 15:59:16 2013 (r325400) +++ head/science/step/Makefile Mon Aug 26 16:06:37 2013 (r325401) @@ -2,6 +2,7 @@ PORTNAME= step PORTVERSION= ${KDE4_VERSION} +PORTREVISION= 1 CATEGORIES= science kde MASTER_SITES= ${MASTER_SITE_KDE} MASTER_SITE_SUBDIR= ${KDE4_BRANCH}/${PORTVERSION}/src @@ -11,7 +12,7 @@ MAINTAINER= kde@FreeBSD.org COMMENT= KDE 4 interactive physics simulator LIB_DEPENDS= qalculate.5:${PORTSDIR}/math/libqalculate \ - gsl.16:${PORTSDIR}/math/gsl + gsl:${PORTSDIR}/math/gsl BUILD_DEPENDS= ${LOCALBASE}/libdata/pkgconfig/eigen2.pc:${PORTSDIR}/math/eigen2
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