Skip site navigation (1)Skip section navigation (2)
Date:      Thu, 29 Jun 2017 12:39:50 -0300
From:      Joseph Mingrone <jrm@FreeBSD.org>
To:        David Wolfskill <david@catwhisker.org>
Cc:        freebsd-ports@freebsd.org
Subject:   Re: math/R: Build failure after PORTREVISION for shlib change
Message-ID:  <86lgoa9515.fsf@phe.ftfl.ca>
References:  <20170628120843.GG1241@albert.catwhisker.org> <86y3sbdhvx.fsf@phe.ftfl.ca> <20170628195155.GC1241@albert.catwhisker.org>

next in thread | previous in thread | raw e-mail | index | archive | help
--=-=-=
Content-Type: text/plain
Content-Transfer-Encoding: quoted-printable

David Wolfskill <david@catwhisker.org> writes:
> g1-227(11.1)[2] make -C /usr/ports/math/R showconfig
> =3D=3D=3D> The following configuration options are available for R-3.4.0_=
1:
>      ICU=3Don: Unicode support via ICU
>      INFO=3Don: GNU info manuals
>      LDOUBLE=3Don: Long double data type
>      LETTER=3Don: US letter paper
>      LIBR=3Don: Shared R library
>      MEMPROF=3Doff: Memory profiling via Rprofmem() and tracemem()
>      NLS=3Don: Native Language Support
>      RPROF=3Don: R profiling via Rprof()
>      X11=3Don: X11 graphics device
> =3D=3D=3D=3D> Require GCC
>      LTO=3Don: Use Link Time Optimization
>      OPENMP=3Don: Parallel processing support via OpenMP
> =3D=3D=3D=3D> Require X11
>      GHOSTSCRIPT=3Don: Graphics device for bitmap files via Ghostscript
>      JPEG=3Don: JPEG graphics device
>      CAIROPANGO=3Don: Cairo graphics device and Pango multi-language text
>      PNG=3Don: PNG graphics device
>      TCLTK=3Don: Tcl/Tk GUI toolkit support
>      TEXDOCS=3Don: Build/Install TeX-dependent documentation files
>      TIFF=3Don: TIFF image format support
> =3D=3D=3D=3D> Options available for the single BLAS: you have to select e=
xactly one of them
>      ATLAS=3Doff: ATLAS BLAS implementation
>      OPENBLAS=3Doff: OpenBLAS BLAS implementation
>      NETLIB=3Doff: Netlib BLAS implementation
>      RBLAS=3Don: Use R-bundled BLAS implementation
> =3D=3D=3D> Use 'make config' to modify these settings
> g1-227(11.1)[3]=20

With those options, the build succeeds in an 11.0-RELEASE-p1 jail.
http://pkg.awarnach.mathstat.dal.ca/data/11amd64-default/2017-06-28_16h53m4=
8s/logs/R-3.4.0_2.log

> Just in case it's relevant, as /usr/local/bin/gcc-ar5 is from gcc5-5.4.0_=
2:

> g1-227(11.1)[5] make -C /usr/ports/lang/gcc5 showconfig
> =3D=3D=3D> The following configuration options are available for gcc5-5.4=
.0_2:
>      BOOTSTRAP=3Don: Build using a full bootstrap
>      GRAPHITE=3Doff: Support for Graphite loop optimizations
>      JAVA=3Don: Java platform support
> =3D=3D=3D> Use 'make config' to modify these settings


Everything matches.  The successful build in poudriere even has the same
line that generates the error for you.

/usr/local/bin/gcc-ar5 -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.=
o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel=
.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o

Could you have something in your environment or in make.conf that's
causing a problem?

Joseph

--=-=-=
Content-Type: application/pgp-signature; name="signature.asc"

-----BEGIN PGP SIGNATURE-----
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=mnVF
-----END PGP SIGNATURE-----
--=-=-=--



Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?86lgoa9515.fsf>