Date: Tue, 20 Aug 2019 10:08:56 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - head-i386-default][science/nwchem] Failed for nwchem-6.8.1.20190816 in build Message-ID: <201908201008.x7KA8uPI025571@beefy11.nyi.freebsd.org>
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Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/nwchem/Makefile 509140 2019-08-17 07:11:26Z yuri $ Log URL: http://beefy11.nyi.freebsd.org/data/head-i386-default/p509395_s351241/logs/nwchem-6.8.1.20190816.log Build URL: http://beefy11.nyi.freebsd.org/build.html?mastername=head-i386-default&build=p509395_s351241 Log: =>> Building science/nwchem build started at Tue Aug 20 08:42:05 UTC 2019 port directory: /usr/ports/science/nwchem package name: nwchem-6.8.1.20190816 building for: FreeBSD head-i386-default-job-16 13.0-CURRENT FreeBSD 13.0-CURRENT 1300040 i386 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/nwchem/Makefile 509140 2019-08-17 07:11:26Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300031 Jail OSVERSION: 1300040 Job Id: 16 !!! Jail is newer than host. (Jail: 1300040, Host: 1300031) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1300040 UNAME_v=FreeBSD 13.0-CURRENT 1300040 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/nwchem/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nwchem/work HOME=/wrkdirs/usr/ports/science/nwchem/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nwchem/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NWCHEM_TOP=/wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src/.. NWCHEM_MODULES=all NWCHEM_LONG_PATHS=Y NWCHEM_TARGET=LINUX USE_MPI=Y USE_INTERNALBLAS=Y EXTERNAL_GA_PATH=/usr/local BLAS_SIZE=4 USE_64TO32=y F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/nwchem/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nwchem/work HOME=/wrkdirs/usr/ports/science/nwchem/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nwchem/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" R ANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.30.0 PERL_VER=5.30 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/nwchem" EXAMPLESDIR="share/examples/nwchem" DATADIR="share/nwchem" WWWDIR="www/nwchem" ETCDIR="etc/nwchem" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nwchem DOCSDIR=/usr/local/share/doc/nwchem EXAMPLESDIR=/usr/local/share/examples/nwchem WWWDIR=/usr/local/www/nwchem ETCDIR=/usr/local/etc/nwchem --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: i386-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300040 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License ECL20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> nwchem-6.8.1.20190816 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [head-i386-default-job-16] Installing pkg-1.11.1... [head-i386-default-job-16] Extracting pkg-1.11.1: .......... done ===> nwchem-6.8.1.20190816 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of nwchem-6.8.1.20190816 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License ECL20 accepted by the user => nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://codeload.github.com/nwchemgit/nwchem/tar.gz/master-oct22_2018-335-gb8ef5a23b?dummy=/nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz fetch: https://codeload.github.com/nwchemgit/nwchem/tar.gz/master-oct22_2018-335-gb8ef5a23b?dummy=/nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz: size unknown fetch: https://codeload.github.com/nwchemgit/nwchem/tar.gz/master-oct22_2018-335-gb8ef5a23b?dummy=/nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz: size of remote file is not known nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23 179 MB 5233 kBps 35s ===> Fetching all distfiles required by nwchem-6.8.1.20190816 for building =========================================================================== =======================<phase: checksum >============================ ===> License ECL20 accepted by the user ===> Fetching all distfiles required by nwchem-6.8.1.20190816 for building => SHA256 Checksum OK for nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License ECL20 accepted by the user ===> Fetching all distfiles required by nwchem-6.8.1.20190816 for building ===> Extracting for nwchem-6.8.1.20190816 => SHA256 Checksum OK for nwchemgit-nwchem-6.8.1.20190816-master-oct22_2018-335-gb8ef5a23b_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ <snip> Compiling sym_sh_pair.F... Got lock on /wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src/../lib/LINUX/libnwcutil.lock ar r /wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src/../lib/LINUX/libnwcutil.a dosymops.o gensym.o gensym_extra.o sym_vec_sym.o ludcmp.o mprint.o opprint.o sym_put_geom.o spgen.o sym_map.o sym_nwc.o sym_apply_op.o sym_get_cart.o sym_grp_name.o sym_ap_cart.o sym_cent_map.o sym_num_ops.o sym_ops_get.o sym_pr_all.o sym_geom_prj.o cross_prod.o sym_op_cname.o sym_pr_ops.o deter3.o sym_op_clsfy.o sym_tr_bs_op.o sym_bs_irrep.o sym_op_type.o sym_char_tab.o sym_pr_ctab.o sym_inv_op.o sym_mo_adapt.o sym_g_sym.o wrcell.o dctr.o sym_irrepname.o sym_abelian.o sym_mol.o sym_sym.o sym_mo_ap_op.o sym_bas_op.o sym_bs_ir_id.o sym_sh_pair.o ranlib /wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src/../lib/LINUX/libnwcutil.a Making libraries in util Compiling output.f... Compiling errquit.F... Compiling ffflush.F... Compiling print_center.F... Compiling util_flush.F... Compiling util_sgroup.F... Compiling util_host.c... Compiling util_date.c... Compiling input_echo.F... Compiling util_transpose.F... Compiling ga_iter_diag.F... Compiling ga_maxelt.F... Compiling nga_idamax.F... Compiling ga_pcg_min.F... Compiling line_search.F... Compiling ga_orth_vec.F... Compiling ga_ran_fill.F... Compiling ga_mix.F... Compiling ga_list.F... Compiling ga_it_proj.F... Compiling ga_screen.F... Compiling ga_get_diag.F... Compiling fortchar.c... Compiling seq_output.F... Compiling ga_mat2col.F... Compiling util_ch_brd.F... Compiling two_ind_trn.F... Compiling util_pname.F... Compiling sread.F... Compiling swrite.F... Compiling banner.f... Compiling util_print.F... Compiling util_module_avail.F... cp util_v_stub.F util_version.F Compiling util_version.F... Compiling util_nwchem_version.F... ./util_ga_version.bash Compiling util_ga_version.F... Compiling util_nwchem_paper.F... Compiling util_nwchem_srcdir.F... Compiling utilc_nwchem_srcdir.c... Compiling mk_fit_xf.F... Compiling int_2c_ga.F... Compiling ga_local_mdot.F... Compiling util_cpusec.F... Compiling util_wallsec.F... Compiling gather.f... Compiling scatter.f... Compiling ga_trace_dg.F... Compiling lcopy.f... Compiling util_legal.F... Compiling util_file_name.F... Compiling util_io_unit.F... Compiling util_speak.c... Compiling util_rtdb_speak.F... Compiling util_file_copy.c... util_file_copy.c:86:22: warning: unused variable 'msgnread' [-Wunused-variable] Integer nread, msgnread=44,msgbuf=45,msglen=sizeof(Integer),node0=0; ^ util_file_copy.c:86:34: warning: unused variable 'msgbuf' [-Wunused-variable] Integer nread, msgnread=44,msgbuf=45,msglen=sizeof(Integer),node0=0; ^ 2 warnings generated. Compiling util_file_unlink.c... Compiling util_system.c... util_system.c:39:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ util_system.c:40:9: warning: unused variable 'Siginit' [-Wunused-variable] void (*Siginit)(); ^ 2 warnings generated. Compiling util_sleep.c... Compiling util_rtdb_state.F... Compiling ecce_print.c... Compiling util_random.F... Compiling util_job.F... Compiling util_getenv.F... Compiling util_getarg.F... Compiling util_nwchemrc.F... Compiling util_md.F... Compiling util_md_c.c... Compiling util_md_sockets.c... Compiling dgewr.F... Compiling atoi.F... Compiling indint.F... Compiling util_wall_remain.c... Compiling ga_normf.F... Compiling corr_mk_ref.F... Compiling nw_inp_from_file.F... Compiling bgj.F... Compiling movecs_ecce.F... Compiling get_density.F... Compiling moeig_read.F... Compiling util_debug.c... Compiling util_erf.F... Compiling util_cflush.c... Compiling util_ascii_plot.F... Compiling util_length_scale.F... Compiling ga_it2.F... Compiling ga_lkain_ext.F... Compiling ma_print.F... Compiling freeze_input.F... Compiling ga_extra.F... Compiling util_test.F... Compiling util_ga_test.F... Compiling util.c... util.c:220:6: warning: variable 'offset1' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] if(j==0){ ^~~~ util.c:224:11: note: uninitialized use occurs here idx1 -= offset1; ^~~~~~~ util.c:220:3: note: remove the 'if' if its condition is always true if(j==0){ ^~~~~~~~ util.c:215:30: note: initialize the variable 'offset1' to silence this warning Integer idx1, idx2, offset1, offset2; ^ = 0 util.c:220:6: warning: variable 'offset2' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] if(j==0){ ^~~~ util.c:225:11: note: uninitialized use occurs here idx2 -= offset2; ^~~~~~~ util.c:220:3: note: remove the 'if' if its condition is always true if(j==0){ ^~~~~~~~ util.c:215:39: note: initialize the variable 'offset2' to silence this warning Integer idx1, idx2, offset1, offset2; ^ = 0 util.c:309:6: warning: variable 'offset1' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] if(j==0){ ^~~~ util.c:312:11: note: uninitialized use occurs here idx1 -= offset1; ^~~~~~~ util.c:309:3: note: remove the 'if' if its condition is always true if(j==0){ ^~~~~~~~ util.c:304:24: note: initialize the variable 'offset1' to silence this warning Integer idx1, offset1; ^ = 0 3 warnings generated. Compiling util_patch_test.F... Compiling util_ndim_test.F... Compiling util_perf_test.F... Compiling util_test_lu.F... Compiling util_test_eig.F... Compiling util_dra_test.F... Compiling util_eaf_test.F... Compiling util_sf_test.F... Compiling ga_lkain_2cpl3.F... Compiling util_io.F... Compiling util_xyz.F... Compiling util_ma.F... Compiling util_mpinap.c... Compiling ga_lkain_2cpl3_ext.F... Compiling util_dgeev.F... Compiling util_nwsort.F... Compiling util_mygabcast.c... Compiling util_getppn.c... Compiling util_units.F... Compiling util_align.F... Compiling util_intrsc2008.F... Compiling util_fadvise.c... ./util_scalapack_info.bash Compiling util_scalapack_info.F... Compiling ga_conjg.F... Compiling nwmolden.F... Compiling ao_1prdm_read.F... Compiling ao_1prdm_write.F... Compiling util_strips.F... Compiling util_poltensor.F... Compiling util_mygop.F... util_mygop.F:13:18: 13 | bigint = ((2**31)-1024)/ | 1 Error: Result of exponentiation at (1) exceeds the range of INTEGER(4) util_mygop.F:50:18: 50 | bigint = ((2**31)-1024)/ | 1 Error: Result of exponentiation at (1) exceeds the range of INTEGER(4) gmake[2]: *** [../config/makefile.h:2999: /wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src/../lib/LINUX/libnwcutil.a(util_mygop.o)] Error 1 gmake[1]: *** [GNUmakefile:105: libraries] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/nwchem/work/nwchem-master-oct22_2018-335-gb8ef5a23b/src' *** Error code 1 Stop. make: stopped in /usr/ports/science/nwchem
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