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Date:      Mon, 16 Sep 2019 22:49:28 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - head-powerpc64-default][biology/canu] Failed for canu-1.8_5 in build
Message-ID:  <201909162249.x8GMnSV6050099@pylon.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     jwb@FreeBSD.org
Last committer: jbeich@FreeBSD.org
Ident:          $FreeBSD: head/biology/canu/Makefile 509290 2019-08-19 15:35:27Z jbeich $
Log URL:        http://pylon.nyi.freebsd.org/data/head-powerpc64-default/p511848_s352239/logs/canu-1.8_5.log
Build URL:      http://pylon.nyi.freebsd.org/build.html?mastername=head-powerpc64-default&build=p511848_s352239
Log:

=>> Building biology/canu
build started at Mon Sep 16 22:43:58 UTC 2019
port directory: /usr/ports/biology/canu
package name: canu-1.8_5
building for: FreeBSD head-powerpc64-default-job-04 13.0-CURRENT FreeBSD 13.0-CURRENT 1300047 powerpc
maintained by: jwb@FreeBSD.org
Makefile ident:      $FreeBSD: head/biology/canu/Makefile 509290 2019-08-19 15:35:27Z jbeich $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300039
Jail OSVERSION: 1300047
Job Id: 04




!!! Jail is newer than host. (Jail: 1300047, Host: 1300039) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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OSVERSION=1300047
UNAME_v=FreeBSD 13.0-CURRENT 1300047
UNAME_r=13.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
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POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-powerpc64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-powerpc64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-powerpc64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
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--MAINTAINER--
jwb@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/canu/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/canu/work  HOME=/wrkdirs/usr/ports/biology/canu/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/canu/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
DESTDIR=/wrkdirs/usr/ports/biology/canu/work/canu-1.8/src CANU_BUILD_ENV=ports PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/canu/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/canu/work  HOME=/wrkdirs/usr/ports/biology/canu/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/canu/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9"
  CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  -Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
JAVASHAREDIR="share/java"  JAVAJARDIR="share/java/classes" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.30.0  PERL_VER=5.30  PERL5_MAN1=lib/perl5/site_perl/man/man1  PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/canu"  EXAMPLESDIR="share/examples/canu"  DATADIR="share/canu"  WWWDIR="www/canu"  ETCDIR="etc/canu"
--End PLIST_SUB--

--SUB_LIST--
JAVASHAREDIR="/usr/local/share/java"  JAVAJARDIR="/usr/local/share/java/classes"  JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="1.8+" PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/canu DOCSDIR=/usr/local/share/doc/canu EXAMPLESDIR=/usr/local/share/examples/canu  WWWDIR=/usr/local/www/canu ETCDIR=/usr/local/etc/canu
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=	true
.endif
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=Using built-in specs. Target: powerpc64-undermydesk-freebsd Configured with: FreeBSD/powerpc64 system compiler Thread model: posix gcc version 4.2.1 20070831 patched [FreeBSD] "/usr/bin/ld" "--eh-frame-hdr" "-Qy" "-melf64ppc_fbsd" "--enable-new-dtags" "-dynamic-linker" "/libexec/ld-elf.so.1" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "-L/usr/lib" "/dev/null" "-lstdc++" "-lm" "-lgcc_s" "-lgcc" "-lc" "-lgcc_s" "-lgcc" "/usr/lib/crtsavres.o" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=cc1: error: unrecognized command line option "-std=c11"
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=cc1: error: unrecognized command line option "-std=gnu11"
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=cc1plus: error: unrecognized command line option "-std=c++0x"
CC_OUTPUT_921dbbb2_f00456e5=cc1plus: error: unrecognized command line option "-std=c++11"
CC_OUTPUT_921dbbb2_65ad290d=cc1plus: error: unrecognized command line option "-std=c++14"
CC_OUTPUT_921dbbb2_f2776b26=cc1plus: error: unrecognized command line option "-std=c++17"
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=cc1plus: error: unrecognized command line option "-std=gnu++11"
CC_OUTPUT_921dbbb2_160933ec=cc1plus: error: unrecognized command line option "-std=gnu++14"
CC_OUTPUT_921dbbb2_fb62803b=cc1plus: error: unrecognized command line option "-std=gnu++17"
_OBJC_CCVERSION_921dbbb2=cc (GCC) 4.2.1 20070831 patched [FreeBSD] Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=powerpc64
OPSYS=FreeBSD
_OSRELEASE=13.0-CURRENT
OSREL=13.0
OSVERSION=1300047
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=262144
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   canu-1.8_5 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.11.1.txz
[head-powerpc64-default-job-04] Installing pkg-1.11.1...
[head-powerpc64-default-job-04] Extracting pkg-1.11.1: .......... done
===>   canu-1.8_5 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of canu-1.8_5
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by canu-1.8_5 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by canu-1.8_5 for building
=> SHA256 Checksum OK for marbl-canu-v1.8_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by canu-1.8_5 for building
===>  Extracting for canu-1.8_5
=> SHA256 Checksum OK for marbl-canu-v1.8_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for canu-1.8_5
===>  Applying FreeBSD patches for canu-1.8_5
===========================================================================
=======================<phase: build-depends  >============================
===>   canu-1.8_5 depends on executable: gmake - not found
===>   Installing existing package /packages/All/gmake-4.2.1_3.txz
[head-powerpc64-default-job-04] Installing gmake-4.2.1_3...
[head-powerpc64-default-job-04] `-- Installing gettext-runtime-0.20.1...
<snip>
      |     ^~~~~~~
utgcns/libboost/boost/smart_ptr/detail/sp_counted_impl.hpp:252:20: error: expected ';' at end of member declaration
  252 |     virtual void * get_deleter( detail::sp_typeinfo const & ti )
      |                    ^~~~~~~~~~~
      |                               ;
utgcns/libboost/boost/smart_ptr/detail/sp_counted_impl.hpp:252:52: error: expected ')' before 'const'
  252 |     virtual void * get_deleter( detail::sp_typeinfo const & ti )
      |                               ~                    ^~~~~~
      |                                                    )
In file included from utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:28,
                 from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/detail/shared_count.hpp:395:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  395 |     explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
      |                                 ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:28,
                 from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/detail/shared_count.hpp:518:12: error: expected ';' at end of member declaration
  518 |     void * get_deleter( sp_typeinfo const & ti ) const
      |            ^~~~~~~~~~~
      |                       ;
utgcns/libboost/boost/smart_ptr/detail/shared_count.hpp:518:36: error: expected ')' before 'const'
  518 |     void * get_deleter( sp_typeinfo const & ti ) const
      |                       ~            ^~~~~~
      |                                    )
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:242:65: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  242 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
      |                                                                 ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:441:31: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  441 |     explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
      |                               ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:454:22: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  454 |     shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
      |                      ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:520:34: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  520 |     shared_ptr & operator=( std::auto_ptr<Y> & r )
      |                                  ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:529:34: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  529 |     shared_ptr & operator=( std::auto_ptr<Y> && r )
      |                                  ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:695:12: error: expected ';' at end of member declaration
  695 |     void * _internal_get_deleter( boost::detail::sp_typeinfo const & ti ) const BOOST_NOEXCEPT
      |            ^~~~~~~~~~~~~~~~~~~~~
      |                                 ;
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:695:61: error: expected ')' before 'const'
  695 |     void * _internal_get_deleter( boost::detail::sp_typeinfo const & ti ) const BOOST_NOEXCEPT
      |                                 ~                           ^~~~~~
      |                                                             )
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:531:38: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
  531 |         this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
      |                                      ^~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/memory:80,
                 from utgcns/libboost/boost/unordered/unordered_set_fwd.hpp:14,
                 from utgcns/libboost/boost/unordered/unordered_set.hpp:17,
                 from utgcns/libboost/boost/unordered_set.hpp:17,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:21,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
/usr/local/lib/gcc9/include/c++/bits/unique_ptr.h:53:28: note: declared here
   53 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from utgcns/libboost/boost/shared_ptr.hpp:17,
                 from utgcns/libboost/boost/property_map/vector_property_map.hpp:14,
                 from utgcns/libboost/boost/property_map/property_map.hpp:600,
                 from utgcns/libboost/boost/graph/adjacency_list.hpp:36,
                 from utgcns/libpbutgcns/AlnGraphBoost.H:69,
                 from utgcns/libcns/unitigConsensus.C:77:
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp: In function 'D* boost::detail::basic_get_deleter(const boost::shared_ptr<U>&)':
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:887:71: error: expected primary-expression before ')' token
  887 |     return static_cast<D *>( p._internal_get_deleter(BOOST_SP_TYPEID(D)) );
      |                                                                       ^
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:887:54: error: there are no arguments to 'BOOST_SP_TYPEID' that depend on a template parameter, so a declaration of 'BOOST_SP_TYPEID' must be available [-fpermissive]
  887 |     return static_cast<D *>( p._internal_get_deleter(BOOST_SP_TYPEID(D)) );
      |                                                      ^~~~~~~~~~~~~~~
utgcns/libboost/boost/smart_ptr/shared_ptr.hpp:887:54: note: (if you use '-fpermissive', G++ will accept your code, but allowing the use of an undeclared name is deprecated)
utgcns/libcns/unitigConsensus.C: In member function 'bool unitigConsensus::alignFragment(bool)':
utgcns/libcns/unitigConsensus.C:1562:23: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1562 |       oaFull->display("utgCns::alignFragment()--", true);
      |                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~
utgcns/libcns/unitigConsensus.C:1660:23: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
 1660 |       oaFull->display("utgCns::alignFragment()-- ", true);
      |                       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
gmake[1]: *** [Makefile:705: /wrkdirs/usr/ports/biology/canu/work/canu-1.8/src/usr/local/FreeBSD-powerpc64/obj/lib/libcanu.a/utgcns/libcns/unitigConsensus.o] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/canu/work/canu-1.8/src'
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/canu



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