Date: Tue, 11 Apr 2017 11:04:07 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 110armv6-quarterly][science/getdp] Failed for getdp-2.8.0_2 in configure Message-ID: <201704111104.v3BB47nJ064542@beefy15.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: stephen@FreeBSD.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: branches/2017Q2/science/getdp/Makefile 437538 2017-04-02 09:08:47Z jbeich $ Log URL: http://beefy15.nyi.freebsd.org/data/110armv6-quarterly/438173/logs/getdp-2.8.0_2.log Build URL: http://beefy15.nyi.freebsd.org/build.html?mastername=110armv6-quarterly&build=438173 Log: ====>> Building science/getdp build started at Tue Apr 11 11:02:56 UTC 2017 port directory: /usr/ports/science/getdp building for: FreeBSD 110armv6-quarterly-job-12 11.0-RELEASE-p8 FreeBSD 11.0-RELEASE-p8 r314125 arm maintained by: stephen@FreeBSD.org Makefile ident: $FreeBSD: branches/2017Q2/science/getdp/Makefile 437538 2017-04-02 09:08:47Z jbeich $ Poudriere version: 3.1.17-3-g2420c0c3 Host OSVERSION: 1200020 Jail OSVERSION: 1100122 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1100122 UNAME_v=FreeBSD 11.0-RELEASE-p8 r314125 UNAME_r=11.0-RELEASE-p8 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/110armv6-quarterly/ref QEMU_EMULATING=1 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=getdp-2.8.0_2 OLDPWD=/ PWD=/usr/local/poudriere/data/.m/110armv6-quarterly/ref/.p/pool MASTERNAME=110armv6-quarterly SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root POUDRIERE_VERSION=3.1.17-3-g2420c0c3 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for getdp-2.8.0_2: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/usr/ports/science/getdp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/getdp/work HOME=/wrkdirs/usr/ports/science/getdp/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/usr/ports/science/getdp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/getdp/work HOME=/wrkdirs/usr/ports/science/getdp/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin" LIBS="" CXX ="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=11.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/getdp" EXAMPLESDIR="share/examples/getdp" DATADIR="share/getdp" WWWDIR="www/getdp" ETCDIR="etc/getdp" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/getdp DOCSDIR=/usr/local/share/doc/getdp EXAMPLESDIR=/usr/local/share/examples/getdp WWWDIR=/usr/local/www/getdp ETCDIR=/usr/local/etc/getdp --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### ARCH=armv6 CONFIGURE_MAX_CMD_LEN=262144 OPSYS=FreeBSD OSREL=11.0 OSVERSION=1100122 PYTHONBASE=/usr/local UID=0 _JAVA_OS_LIST_REGEXP=native\|linux _JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun _JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+ _OSRELEASE=11.0-RELEASE-p8 #### Misc Poudriere #### GID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> getdp-2.8.0_2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.1.txz pkg-static: Warning: Major OS version upgrade detected. Running "pkg-static install -f pkg" recommended [110armv6-quarterly-job-12] Installing pkg-1.10.1... [110armv6-quarterly-job-12] Extracting pkg-1.10.1: .......... done ===> getdp-2.8.0_2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of getdp-2.8.0_2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_2 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_2 for building => SHA256 Checksum OK for getdp-2.8.0-source.tgz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by getdp-2.8.0_2 for building ===> Extracting for getdp-2.8.0_2 => SHA256 Checksum OK for getdp-2.8.0-source.tgz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for getdp-2.8.0_2 ===> Applying FreeBSD patches for getdp-2.8.0_2 =========================================================================== =======================<phase: build-depends >============================ ===> getdp-2.8.0_2 depends on executable: gfortran5 - not found ===> Installing existing package /packages/All/gcc-5.4.0.txz pkg-static: Warning: Major OS version upgrade detected. Running "pkg-static install -f pkg" recommended [110armv6-quarterly-job-12] Installing gcc-5.4.0... [110armv6-quarterly-job-12] `-- Installing binutils-2.28,1... [110armv6-quarterly-job-12] | `-- Installing gettext-runtime-0.19.8.1_1... [110armv6-quarterly-job-12] | | `-- Installing indexinfo-0.2.6... [110armv6-quarterly-job-12] | | `-- Extracting indexinfo-0.2.6: .... done [110armv6-quarterly-job-12] | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done [110armv6-quarterly-job-12] `-- Extracting binutils-2.28,1: .......... done [110armv6-quarterly-job-12] `-- Installing gmp-6.1.2... [110armv6-quarterly-job-12] `-- Extracting gmp-6.1.2: .......... done [110armv6-quarterly-job-12] `-- Installing mpc-1.0.3... [110armv6-quarterly-job-12] | `-- Installing mpfr-3.1.5_1... [110armv6-quarterly-job-12] | `-- Extracting mpfr-3.1.5_1: .......... done [110armv6-quarterly-job-12] `-- Extracting mpc-1.0.3: ...... done [110armv6-quarterly-job-12] Extracting gcc-5.4.0: .......... done Message from gcc-5.4.0: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc5 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> getdp-2.8.0_2 depends on executable: gfortran5 - found ===> Returning to build of getdp-2.8.0_2 ===> getdp-2.8.0_2 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-3.7.2.txz pkg-static: Warning: Major OS version upgrade detected. Running "pkg-static install -f pkg" recommended [110armv6-quarterly-job-12] Installing cmake-3.7.2... [110armv6-quarterly-job-12] `-- Installing cmake-modules-3.7.2... [110armv6-quarterly-job-12] `-- Extracting cmake-modules-3.7.2: .......... done [110armv6-quarterly-job-12] `-- Installing curl-7.53.1_1... [110armv6-quarterly-job-12] | `-- Installing ca_root_nss-3.30... [110armv6-quarterly-job-12] | `-- Extracting ca_root_nss-3.30: ........ done [110armv6-quarterly-job-12] | `-- Installing libnghttp2-1.21.0... [110armv6-quarterly-job-12] | `-- Extracting libnghttp2-1.21.0: .......... done [110armv6-quarterly-job-12] `-- Extracting curl-7.53.1_1: .......... done [110armv6-quarterly-job-12] `-- Installing expat-2.2.0_1... [110armv6-quarterly-job-12] `-- Extracting expat-2.2.0_1: .......... done [110armv6-quarterly-job-12] `-- Installing jsoncpp-1.8.0_2... [110armv6-quarterly-job-12] `-- Extracting jsoncpp-1.8.0_2: .......... done [110armv6-quarterly-job-12] `-- Installing libarchive-3.3.1,1... [110armv6-quarterly-job-12] | `-- Installing liblz4-1.7.5,1... [110armv6-quarterly-job-12] | `-- Extracting liblz4-1.7.5,1: .......... done [110armv6-quarterly-job-12] | `-- Installing lzo2-2.10_1... [110armv6-quarterly-job-12] | `-- Extracting lzo2-2.10_1: .......... done [110armv6-quarterly-job-12] `-- Extracting libarchive-3.3.1,1: .......... done [110armv6-quarterly-job-12] `-- Installing libuv-1.11.0... [110armv6-quarterly-job-12] `-- Extracting libuv-1.11.0: .......... done [110armv6-quarterly-job-12] Extracting cmake-3.7.2: .......... done Message from ca_root_nss-3.30: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> getdp-2.8.0_2 depends on file: /usr/local/bin/cmake - found ===> Returning to build of getdp-2.8.0_2 ===> getdp-2.8.0_2 depends on file: /usr/local/bin/as - found =========================================================================== =======================<phase: lib-depends >============================ ===> getdp-2.8.0_2 depends on shared library: libgsl.so - not found ===> Installing existing package /packages/All/gsl-1.16_2.txz pkg-static: Warning: Major OS version upgrade detected. Running "pkg-static install -f pkg" recommended [110armv6-quarterly-job-12] Installing gsl-1.16_2... [110armv6-quarterly-job-12] Extracting gsl-1.16_2: .......... done Message from gsl-1.16_2: ===> NOTICE: The gsl port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> getdp-2.8.0_2 depends on shared library: libgsl.so - found (/usr/local/lib/libgsl.so) ===> Returning to build of getdp-2.8.0_2 ===> getdp-2.8.0_2 depends on shared library: liblapack.so - not found ===> Installing existing package /packages/All/lapack-3.5.0_2.txz pkg-static: Warning: Major OS version upgrade detected. Running "pkg-static install -f pkg" recommended [110armv6-quarterly-job-12] Installing lapack-3.5.0_2... [110armv6-quarterly-job-12] `-- Installing blas-3.5.0_3... [110armv6-quarterly-job-12] `-- Extracting blas-3.5.0_3: ....... done [110armv6-quarterly-job-12] Extracting lapack-3.5.0_2: .......... done ===> getdp-2.8.0_2 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so) ===> Returning to build of getdp-2.8.0_2 =========================================================================== =======================<phase: configure >============================ ===> Configuring for getdp-2.8.0_2 ===> Performing in-source build /bin/mkdir -p /wrkdirs/usr/ports/science/getdp/work/getdp-2.8.0-source -- The CXX compiler identification is Clang 3.9.1 -- The C compiler identification is Clang 3.9.1 -- The Fortran compiler identification is GNU 5.4.0 -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /nxb-bin/usr/bin/cc -- Check for working C compiler: /nxb-bin/usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working Fortran compiler: /usr/local/bin/gfortran5 -- Check for working Fortran compiler: /usr/local/bin/gfortran5 -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/local/bin/gfortran5 supports Fortran 90 -- Checking whether /usr/local/bin/gfortran5 supports Fortran 90 -- yes -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- A library with BLAS API found. -- Found Blas -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- Found Lapack -- Found Legacy -- Found Sparskit -- System ARPACK not found: using contrib/Arpack instead -- Found Arpack -- Found Gsl -- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) -- Looking for vsnprintf -- Looking for vsnprintf - found -- Looking for sys/socket.h -- Looking for sys/socket.h - found -- Check size of socklen_t -- Check size of socklen_t - done -- Check size of intptr_t -- Check size of intptr_t - done -- Performing Test NOOPT -- Performing Test NOOPT - Success -- Performing Test WALL CMake Error: Generator: execution of make failed. Make command was: "/usr/bin/make" "cmTC_eada2/fast" -- Performing Test WALL - Failed -- Performing Test NOWARN -- Performing Test NOWARN - Success -- Will test GetDP stand-alone -- -- GetDP 2.8.0 has been configured for FreeBSD: -- -- * Build options: Arpack Blas Gsl Lapack Legacy Sparskit -- * Build type: Release -- * C compiler: /nxb-bin/usr/bin/cc -- * C++ compiler: /nxb-bin/usr/bin/c++ -- * Fortran compiler: /usr/local/bin/gfortran5 -- * Install prefix: /usr/local -- -- Configuring incomplete, errors occurred! See also "/wrkdirs/usr/ports/science/getdp/work/getdp-2.8.0-source/CMakeFiles/CMakeOutput.log". See also "/wrkdirs/usr/ports/science/getdp/work/getdp-2.8.0-source/CMakeFiles/CMakeError.log". *** Error code 1 Stop. make: stopped in /usr/ports/science/getdp
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