Date: Wed, 27 Jul 2016 17:00:55 +0000 From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 211393] math/R: update patches and options Message-ID: <bug-211393-13-Fy6hkEYe12@https.bugs.freebsd.org/bugzilla/> In-Reply-To: <bug-211393-13@https.bugs.freebsd.org/bugzilla/> References: <bug-211393-13@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D211393 --- Comment #3 from Rainer Hurling <rhurlin@gwdg.de> --- ##### Hmm, I tried with GCC options (LTO and OpenMP): R is now configured for amd64-portbld-freebsd12.0 Source directory: . Installation directory: /usr/local C compiler: gcc48 -std=3Dgnu99 -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -Wl,-rpath=3D/usr/local/lib/g= cc48 -fno-strict-aliasing Fortran 77 compiler: gfortran48 -O -Wl,-rpath=3D/usr/local/lib/gcc= 48 C++ compiler: g++48 -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -Wl,-rpath=3D/usr/local/lib/gcc48 -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -Wl,-rpath=3D/usr/local/lib/gcc48 C++11 compiler: g++48 -std=3Dc++11 -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -Wl,-rpath=3D/usr/local/lib/g= cc48 -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -Wl,-rpath=3D/usr/local/lib/gcc48 C++14 compiler:=20=20=20=20=20=20=20=20=20=20=20=20=20=20 Fortran 90/95 compiler: gfortran48 -Wl,-rpath=3D/usr/local/lib/gcc48 Obj-C compiler: gcc48 -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -Wl,-rpath=3D/usr/local/lib/gcc48 -fno-strict-aliasing -Wno-import -DLIBICONV_PLUG -fobjc-exceptions Interfaces supported: X11, tcltk External libraries: readline, BLAS(generic), curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, shared BLAS, R profiling, me= mory profiling Capabilities skipped:=20=20=20=20=20=20 Options not enabled:=20=20=20=20=20=20=20 Recommended packages: yes ##### and without GCC options: R is now configured for amd64-portbld-freebsd12.0 Source directory: . Installation directory: /usr/local C compiler: cc -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -fno-strict-aliasing Fortran 77 compiler: gfortran48 -O -Wl,-rpath=3D/usr/local/lib/gcc= 48 C++ compiler: c++ -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include C++11 compiler: c++ -std=3Dc++11 -O2 -pipe -DLIBICONV_PLUG -is= ystem /usr/local/include -fstack-protector -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include C++14 compiler: c++ -std=3Dc++14 -O2 -pipe -DLIBICONV_PLUG -is= ystem /usr/local/include -fstack-protector -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include Fortran 90/95 compiler: gfortran48 -Wl,-rpath=3D/usr/local/lib/gcc48 Obj-C compiler: cc -O2 -pipe -DLIBICONV_PLUG -isystem /usr/local/include -fstack-protector -fno-strict-aliasing -Wno-import -DLIBICONV_PLUG -fobjc-exceptions Interfaces supported: X11, tcltk External libraries: readline, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, shared BLAS, R profiling Capabilities skipped:=20=20=20=20=20=20 Options not enabled: memory profiling Recommended packages: yes In the second case (GCC options disabled), you get a mixture of both compil= er suites (clang for most, gcc for Fortran). I don't know, if this could be a problem with R packages, depending on them. In the past, I always tried to avoid this kind of mixture. Maybe, that it was not necessary ... --=20 You are receiving this mail because: You are the assignee for the bug.=
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