Skip site navigation (1)Skip section navigation (2)
Date:      Wed, 22 Jan 2003 15:10:20 +0100
From:      "Simon 'corecode' Schubert" <corecode@corecode.ath.cx>
To:        Fernan Aguero <fernan@iib.unsam.edu.ar>
Cc:        FreeBSD-gnats-submit@FreeBSD.org, freebsd-ports-bugs@FreeBSD.org
Subject:   Re: ports/47303: Update biology/p5-bioperl to latest release
Message-ID:  <20030122151020.6b099a69.corecode@corecode.ath.cx>
In-Reply-To: <20030122130824.GA35269@iib.unsam.edu.ar>
References:  <200301211709.h0LH91XB031148@pi.iib.unsam.edu.ar> <200301211710.h0LHA2Wr051373@freefall.freebsd.org> <20030122130824.GA35269@iib.unsam.edu.ar>

next in thread | previous in thread | raw e-mail | index | archive | help
--=.eEv)v2aQFD:_M1
Content-Type: text/plain; charset=US-ASCII
Content-Transfer-Encoding: 7bit

Lately Fernan Aguero told:

> diff -ruN p5-bioperl.new/Makefile p5-bioperl/Makefile
> --- p5-bioperl.new/Makefile	Wed Jan 22 10:01:22 2003
> +++ p5-bioperl/Makefile	Fri Jan 25 08:46:09 2002

woo! reverse diff is hard to read, but here we go:

[...]
> -MASTER_SITES=		ftp://bioperl.org/pub/DIST/ \
> -                 http://bioperl.org/DIST \
                                           ^ add /
[...]
> -DISTFILES=			${DISTNAME}${EXTRACT_SUFX}

is that needed?

[...]
>  # These are all run-time dependencies, but listing them in ${BUILD_DEPENDS}
>  # prevents a flood of build-time warnings.
> -# 
> -# Text::Shellwords does not appear to be in the ports tree 
> -# and is required by Bio::Graphics:FeatureFile.pm
> -#
> -# DB_File is required to access Berkeley DB
> -# by Bio::DB::Flat and Bio::SeqFeature::Collection
> -# but is not in the ports tree
> -# 
> -# perhaps they're included with perl?
> -# let me know if they are

is this optional or mandatory? if so they need to be ported

[...]
> -.for doc in AUTHORS BUGS Changes DEPRECATED FAQ INSTALL LICENSE PLATFORMS README
> -	${INSTALL_MAN} ${WRKSRC}/${doc} ${DOCSDIR}

better use ${INSTALL_DATA}?

cheers
  simon

-- 
/"\   http://corecode.ath.cx/#donate
\ /
 \     ASCII Ribbon Campaign
/ \  Against HTML Mail and News

--=.eEv)v2aQFD:_M1
Content-Type: application/pgp-signature

-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.2.1 (FreeBSD)

iD8DBQE+LqZRr5S+dk6z85oRAvgfAKCnQnwjQ/LPEaEOHf8AUJ1pXampEwCfbsmR
ZEzxKX01dgh1D0NK0APS/eQ=
=hbxa
-----END PGP SIGNATURE-----

--=.eEv)v2aQFD:_M1--

To Unsubscribe: send mail to majordomo@FreeBSD.org
with "unsubscribe freebsd-ports-bugs" in the body of the message




Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?20030122151020.6b099a69.corecode>